Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM > Member List

This is the complete list of members for AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >, including all inherited members.

AbstractDynamicLinearPdeSolver(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
AbstractExtendedBidomainSolver(bool bathSimulation, AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, ExtendedBidomainTissue< SPACE_DIM > *pTissue, BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, 3 > *pBcc)AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >
AbstractLinearPdeSolver(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh)AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >inline
CheckCompatibilityCondition()AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protectedvirtual
FinaliseLinearSystem(Vec existingSolution)AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protectedvirtual
FollowingSolveLinearSystem(Vec currentSolution)AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >inlinevirtual
GenerateNullBasis() constAbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protectedvirtual
GetBoundaryConditions()AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >inline
GetLinearSystem()AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >inline
InitialiseForSolve(Vec initialSolution)AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protectedvirtual
InitialiseHdf5Writer()AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mBathSimulationAbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protected
mFilenamePrefixAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mFixedExtracellularPotentialNodesAbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protected
mIdealTimeStepAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mInitialConditionAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mLastWorkingTimeStepAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mMatrixIsAssembledAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mMatrixIsConstantAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mNullSpaceCreatedAbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protected
mOutputDirectoryAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mOutputToParallelVtkAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mOutputToTxtAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mOutputToVtkAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mpBoundaryConditionsAbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protected
mpConfigAbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protected
mpExtendedBidomainAssemblerAbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protected
mpExtendedBidomainTissueAbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protected
mpHdf5WriterAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mpLinearSystemAbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >protected
mpMeshAbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >protected
mPrintingTimestepMultipleAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mpTimeAdaptivityControllerAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mRowForAverageOfPhiZeroedAbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protected
mTendAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mTimesSetAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mTstartAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
mVariableColumnIdsAbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
PrepareForSetupLinearSystem(Vec existingSolution)AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >protectedvirtual
SetFixedExtracellularPotentialNodes(std::vector< unsigned > fixedExtracellularPotentialNodes)AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >
SetInitialCondition(Vec initialCondition)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
SetMatrixIsNotAssembled()AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
SetOutputDirectoryAndPrefix(std::string outputDirectory, std::string prefix)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
SetOutputToParallelVtk(bool output)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
SetOutputToTxt(bool output)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
SetOutputToVtk(bool output)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
SetPrintingTimestepMultiple(unsigned multiple)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
SetRowForAverageOfPhiZeroed(unsigned rowMeanPhiEZero)AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >
SetTimeAdaptivityController(AbstractTimeAdaptivityController *pTimeAdaptivityController)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
SetTimes(double tStart, double tEnd)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
SetTimeStep(double dt)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >
SetupLinearSystem(Vec currentSolution, bool computeMatrix)=0AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >pure virtual
Solve()AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >virtual
WriteOneStep(double time, Vec solution)AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, 3 >protected
~AbstractExtendedBidomainSolver()AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >virtual
~AbstractLinearPdeSolver()AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >inlinevirtual