AbstractOdeBasedPhaseBasedCellCycleModel Member List

This is the complete list of members for AbstractOdeBasedPhaseBasedCellCycleModel, including all inherited members.

AbstractCellCycleModel(const AbstractCellCycleModel &rModel)	AbstractCellCycleModel	protected
AbstractCellCycleModel()	AbstractCellCycleModel
AbstractOdeBasedPhaseBasedCellCycleModel(const AbstractOdeBasedPhaseBasedCellCycleModel &rModel)	AbstractOdeBasedPhaseBasedCellCycleModel	protected
AbstractOdeBasedPhaseBasedCellCycleModel(double lastTime=SimulationTime::Instance() ->GetTime(), boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())	AbstractOdeBasedPhaseBasedCellCycleModel
AbstractPhaseBasedCellCycleModel(const AbstractPhaseBasedCellCycleModel &rModel)	AbstractPhaseBasedCellCycleModel	protected
AbstractPhaseBasedCellCycleModel()	AbstractPhaseBasedCellCycleModel
AdjustOdeParameters(double currentTime)	CellCycleModelOdeHandler	protectedvirtual
boost::serialization::access	AbstractOdeBasedPhaseBasedCellCycleModel	friend
CanCellTerminallyDifferentiate()	AbstractCellCycleModel	virtual
CellCycleModelOdeHandler(const CellCycleModelOdeHandler &rHandler)	CellCycleModelOdeHandler	protected
CellCycleModelOdeHandler(double lastTime=SimulationTime::Instance() ->GetTime(), boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())	CellCycleModelOdeHandler
CreateCellCycleModel()=0	AbstractCellCycleModel	pure virtual
GetAge()	AbstractCellCycleModel
GetAverageStemCellCycleTime()	AbstractPhaseBasedCellCycleModel	virtual
GetAverageTransitCellCycleTime()	AbstractPhaseBasedCellCycleModel	virtual
GetBirthTime() const	AbstractCellCycleModel
GetCell()	AbstractCellCycleModel
GetCurrentCellCyclePhase() const	AbstractPhaseBasedCellCycleModel
GetDimension() const	AbstractCellCycleModel
GetDt()	CellCycleModelOdeHandler
GetG1Duration() const	AbstractPhaseBasedCellCycleModel	virtual
GetG2Duration() const	AbstractPhaseBasedCellCycleModel	virtual
GetIdentifier() const	Identifiable
GetMDuration() const	AbstractPhaseBasedCellCycleModel	virtual
GetMinimumGapDuration() const	AbstractPhaseBasedCellCycleModel
GetOdeSolver() const	CellCycleModelOdeHandler
GetOdeStopTime()	AbstractOdeBasedPhaseBasedCellCycleModel
GetOdeSystem() const	CellCycleModelOdeHandler
GetProteinConcentrations() const	CellCycleModelOdeHandler
GetSDuration() const	AbstractPhaseBasedCellCycleModel	virtual
GetSG2MDuration() const	AbstractPhaseBasedCellCycleModel
GetStemCellG1Duration() const	AbstractPhaseBasedCellCycleModel
GetTransitCellG1Duration() const	AbstractPhaseBasedCellCycleModel
Initialise()	AbstractCellCycleModel	virtual
InitialiseDaughterCell()	AbstractCellCycleModel	virtual
mBirthTime	AbstractCellCycleModel	protected
mCurrentCellCyclePhase	AbstractPhaseBasedCellCycleModel	protected
mDimension	AbstractCellCycleModel	protected
mDivideTime	AbstractOdeBasedPhaseBasedCellCycleModel	protected
mDt	CellCycleModelOdeHandler	protected
mFinishedRunningOdes	CellCycleModelOdeHandler	protected
mG1Duration	AbstractPhaseBasedCellCycleModel	protected
mG2Duration	AbstractPhaseBasedCellCycleModel	protected
mG2PhaseStartTime	AbstractOdeBasedPhaseBasedCellCycleModel	protected
mLastTime	CellCycleModelOdeHandler	protected
mMDuration	AbstractPhaseBasedCellCycleModel	protected
mMinimumGapDuration	AbstractPhaseBasedCellCycleModel	protected
mpCell	AbstractCellCycleModel	protected
mpOdeSolver	CellCycleModelOdeHandler	protected
mpOdeSystem	CellCycleModelOdeHandler	protected
mReadyToDivide	AbstractCellCycleModel	protected
mSDuration	AbstractPhaseBasedCellCycleModel	protected
mStemCellG1Duration	AbstractPhaseBasedCellCycleModel	protected
mTransitCellG1Duration	AbstractPhaseBasedCellCycleModel	protected
AbstractPhaseBasedCellCycleModel::operator=(const AbstractCellCycleModel &)	AbstractCellCycleModel	private
OutputCellCycleModelInfo(out_stream &rParamsFile)	AbstractCellCycleModel
OutputCellCycleModelParameters(out_stream &rParamsFile)	AbstractOdeBasedPhaseBasedCellCycleModel	virtual
ReadyToDivide()	AbstractPhaseBasedCellCycleModel	virtual
ResetForDivision()	AbstractOdeBasedPhaseBasedCellCycleModel	virtual
serialize(Archive &archive, const unsigned int version)	AbstractOdeBasedPhaseBasedCellCycleModel	inlineprivate
SetBirthTime(double birthTime)	AbstractOdeBasedPhaseBasedCellCycleModel	virtual
SetCell(CellPtr pCell)	AbstractCellCycleModel
SetDimension(unsigned dimension)	AbstractCellCycleModel
SetDt(double timeStep)	CellCycleModelOdeHandler
SetG2Duration(double g2Duration)	AbstractPhaseBasedCellCycleModel
SetLastTime(double lastTime)	CellCycleModelOdeHandler
SetMDuration(double mDuration)	AbstractPhaseBasedCellCycleModel
SetMinimumGapDuration(double minimumGapDuration)	AbstractPhaseBasedCellCycleModel
SetOdeSystem(AbstractOdeSystem *pOdeSystem)	CellCycleModelOdeHandler
SetProteinConcentrationsForTestsOnly(double lastTime, std::vector< double > proteinConcentrations)	CellCycleModelOdeHandler
SetSDuration(double sDuration)	AbstractPhaseBasedCellCycleModel
SetStateVariables(const std::vector< double > &rStateVariables)	CellCycleModelOdeHandler
SetStemCellG1Duration(double stemCellG1Duration)	AbstractPhaseBasedCellCycleModel	virtual
SetTransitCellG1Duration(double transitCellG1Duration)	AbstractPhaseBasedCellCycleModel	virtual
SolveOdeToTime(double currentTime)	CellCycleModelOdeHandler	protected
TidyTemplatedExportIdentifier(std::string identifier) const	Identifiable	private
UpdateCellCyclePhase()	AbstractOdeBasedPhaseBasedCellCycleModel	virtual
~AbstractCellCycleModel()	AbstractCellCycleModel	virtual
~AbstractOdeBasedPhaseBasedCellCycleModel()	AbstractOdeBasedPhaseBasedCellCycleModel	virtual
~AbstractPhaseBasedCellCycleModel()	AbstractPhaseBasedCellCycleModel	virtual
~CellCycleModelOdeHandler()	CellCycleModelOdeHandler	virtual
~Identifiable()	Identifiable	virtual