Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
DeltaNotchSrnModel Member List

This is the complete list of members for DeltaNotchSrnModel, including all inherited members.

AbstractOdeSrnModel(const AbstractOdeSrnModel &rModel)AbstractOdeSrnModelprotected
AbstractOdeSrnModel(unsigned stateSize, boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())AbstractOdeSrnModel
AbstractSrnModel(const AbstractSrnModel &rModel)AbstractSrnModelprotected
AbstractSrnModel()AbstractSrnModel
AddMergedEdgeSrn(AbstractSrnModel *pMergedEdgeSrn)AbstractSrnModelvirtual
AddShrunkEdgeSrn(AbstractSrnModel *pShrunkEdgeSrn)AbstractSrnModelvirtual
AddShrunkEdgeToInterior(AbstractSrnModel *pShrunkEdgeSrn)AbstractSrnModelvirtual
AddSrnQuantities(AbstractSrnModel *pOtherSrn, const double scale=1.0)AbstractSrnModelvirtual
AdjustOdeParameters(double currentTime)CellCycleModelOdeHandlerprotectedvirtual
boost::serialization::accessDeltaNotchSrnModelfriend
CellCycleModelOdeHandler(const CellCycleModelOdeHandler &rHandler)CellCycleModelOdeHandlerprotected
CellCycleModelOdeHandler(double lastTime=SimulationTime::Instance() ->GetTime(), boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())CellCycleModelOdeHandler
CreateSrnModel()DeltaNotchSrnModelvirtual
DeltaNotchSrnModel(const DeltaNotchSrnModel &rModel)DeltaNotchSrnModelprotected
DeltaNotchSrnModel(boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())DeltaNotchSrnModel
GetCell()AbstractSrnModel
GetDelta()DeltaNotchSrnModel
GetDt()CellCycleModelOdeHandler
GetEdgeLocalIndex()AbstractSrnModel
GetIdentifier() constIdentifiable
GetMeanNeighbouringDelta()DeltaNotchSrnModel
GetNotch()DeltaNotchSrnModel
GetOdeSolver() constCellCycleModelOdeHandler
GetOdeSystem() constCellCycleModelOdeHandler
GetProteinConcentrations() constCellCycleModelOdeHandler
GetSimulatedToTime() constAbstractSrnModel
HasEdgeModel() constAbstractSrnModel
Initialise()DeltaNotchSrnModelvirtual
AbstractOdeSrnModel::Initialise(AbstractOdeSystem *pOdeSystem)AbstractOdeSrnModelprotected
InitialiseDaughterCell()AbstractSrnModelvirtual
mDtCellCycleModelOdeHandlerprotected
mEdgeLocalIndexAbstractSrnModelprotected
mFinishedRunningOdesCellCycleModelOdeHandlerprotected
mInitialConditionsAbstractOdeSrnModelprotected
mIsEdgeBasedModelAbstractSrnModelprotected
mLastTimeCellCycleModelOdeHandlerprotected
mpCellAbstractSrnModelprotected
mpOdeSolverCellCycleModelOdeHandlerprotected
mpOdeSystemCellCycleModelOdeHandlerprotected
mSimulatedToTimeAbstractSrnModelprotected
mStateSizeAbstractOdeSrnModelprotected
AbstractSrnModel::operator=(const AbstractSrnModel &)AbstractSrnModelprivate
OutputSrnModelInfo(out_stream &rParamsFile)AbstractSrnModel
OutputSrnModelParameters(out_stream &rParamsFile)DeltaNotchSrnModelvirtual
ResetForDivision()AbstractOdeSrnModelvirtual
ScaleSrnVariables(const double theta)AbstractOdeSrnModelvirtual
serialize(Archive &archive, const unsigned int version)DeltaNotchSrnModelinlineprivate
SetCell(CellPtr pCell)AbstractSrnModelvirtual
SetDt(double timeStep)CellCycleModelOdeHandler
SetEdgeLocalIndex(unsigned index)AbstractSrnModel
SetEdgeModelIndicator(const bool isEdgeModel)AbstractSrnModel
SetInitialConditions(std::vector< double > initialConditions)AbstractOdeSrnModel
SetLastTime(double lastTime)CellCycleModelOdeHandler
SetOdeSystem(AbstractOdeSystem *pOdeSystem)CellCycleModelOdeHandler
SetProteinConcentrationsForTestsOnly(double lastTime, std::vector< double > proteinConcentrations)CellCycleModelOdeHandler
SetSimulatedToTime(double simulatedToTime)AbstractSrnModel
SetStateVariables(const std::vector< double > &rStateVariables)CellCycleModelOdeHandler
SimulateToCurrentTime()DeltaNotchSrnModelvirtual
SolveOdeToTime(double currentTime)CellCycleModelOdeHandlerprotected
SplitEdgeSrn(const double relativePosition)AbstractSrnModelvirtual
TidyTemplatedExportIdentifier(std::string identifier) constIdentifiableprivate
UpdateDeltaNotch()DeltaNotchSrnModel
~AbstractOdeSrnModel()AbstractOdeSrnModelvirtual
~AbstractSrnModel()AbstractSrnModelvirtual
~CellCycleModelOdeHandler()CellCycleModelOdeHandlervirtual
~Identifiable()Identifiablevirtual