| a6 | Kerchoffs2003ContractionModel | privatestatic |
| a7 | Kerchoffs2003ContractionModel | privatestatic |
| AbstractContractionModel() | AbstractContractionModel | inline |
| AbstractOdeBasedContractionModel(unsigned numStateVariables) | AbstractOdeBasedContractionModel | inline |
| AbstractOdeSystem(unsigned numberOfStateVariables) | AbstractOdeSystem | |
| AbstractParameterisedSystem(unsigned numberOfStateVariables) | AbstractParameterisedSystem< std::vector< double > > | |
| AbstractUntemplatedParameterisedSystem(unsigned numberOfStateVariables) | AbstractUntemplatedParameterisedSystem | |
| CalculateRootFunction(double time, const std::vector< double > &rY) | AbstractOdeSystem | virtual |
| CalculateStoppingEvent(double time, const std::vector< double > &rY) | AbstractOdeSystem | virtual |
| CheckParametersOnLoad(const std::vector< double > &rParameters, const std::vector< std::string > &rParameterNames) | AbstractParameterisedSystem< std::vector< double > > | protected |
| ComputeDerivedQuantities(double time, const std::vector< double > &rState) | AbstractParameterisedSystem< std::vector< double > > | virtual |
| ComputeDerivedQuantitiesFromCurrentState(double time) | AbstractParameterisedSystem< std::vector< double > > | |
| DumpState(const std::string &rMessage) | AbstractParameterisedSystem< std::vector< double > > | protected |
| DumpState(const std::string &rMessage, std::vector< double > Y) | AbstractParameterisedSystem< std::vector< double > > | protected |
| DumpState(const std::string &rMessage, std::vector< double > Y, double time) | AbstractParameterisedSystem< std::vector< double > > | protected |
| Ea | Kerchoffs2003ContractionModel | privatestatic |
| EvaluateYDerivatives(double time, const std::vector< double > &rY, std::vector< double > &rDY) | Kerchoffs2003ContractionModel | virtual |
| GetActiveTension(double lengthOfContractileElement) | Kerchoffs2003ContractionModel | private |
| GetActiveTension() | Kerchoffs2003ContractionModel | virtual |
| GetAnyVariable(unsigned index, double time=0.0, std::vector< double > *pDerivedQuantities=NULL) | AbstractParameterisedSystem< std::vector< double > > | |
| GetAnyVariable(const std::string &rName, double time=0.0, std::vector< double > *pDerivedQuantities=NULL) | AbstractParameterisedSystem< std::vector< double > > | |
| GetAnyVariableIndex(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetAnyVariableUnits(unsigned index) const | AbstractUntemplatedParameterisedSystem | |
| GetAnyVariableUnits(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetAttribute(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetDerivedQuantityIndex(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetDerivedQuantityUnits(unsigned index) const | AbstractUntemplatedParameterisedSystem | |
| GetInitialConditions() const | AbstractParameterisedSystem< std::vector< double > > | |
| GetNextActiveTension() | Kerchoffs2003ContractionModel | virtual |
| GetNumberOfAttributes() const | AbstractUntemplatedParameterisedSystem | |
| GetNumberOfDerivedQuantities() const | AbstractUntemplatedParameterisedSystem | |
| GetNumberOfParameters() const | AbstractUntemplatedParameterisedSystem | |
| GetNumberOfStateVariables() const | AbstractUntemplatedParameterisedSystem | |
| GetParameter(unsigned index) const | AbstractParameterisedSystem< std::vector< double > > | |
| GetParameter(const std::string &rName) const | AbstractParameterisedSystem< std::vector< double > > | |
| GetParameterIndex(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetParameterUnits(unsigned index) const | AbstractUntemplatedParameterisedSystem | |
| GetStateMessage(const std::string &rMessage, std::vector< double > Y) | AbstractParameterisedSystem< std::vector< double > > | private |
| GetStateVariable(unsigned index) const | AbstractParameterisedSystem< std::vector< double > > | |
| GetStateVariable(const std::string &rName) const | AbstractParameterisedSystem< std::vector< double > > | |
| GetStateVariableIndex(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| GetStateVariables() | AbstractParameterisedSystem< std::vector< double > > | |
| GetStateVariableUnits(unsigned index) const | AbstractUntemplatedParameterisedSystem | |
| GetSystemInformation() const | AbstractUntemplatedParameterisedSystem | |
| GetSystemName() const | AbstractUntemplatedParameterisedSystem | |
| GetUseAnalyticJacobian() | AbstractOdeSystem | |
| HasAnyVariable(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| HasAttribute(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| HasDerivedQuantity(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| HasParameter(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| HasStateVariable(const std::string &rName) const | AbstractUntemplatedParameterisedSystem | |
| IsStretchDependent() | Kerchoffs2003ContractionModel | inlinevirtual |
| IsStretchRateDependent() | Kerchoffs2003ContractionModel | inlinevirtual |
| Kerchoffs2003ContractionModel() | Kerchoffs2003ContractionModel | |
| ld | Kerchoffs2003ContractionModel | privatestatic |
| load(Archive &archive, const unsigned int version) | AbstractOdeSystem | inlineprivate |
| ls0 | Kerchoffs2003ContractionModel | privatestatic |
| mActivationTime | Kerchoffs2003ContractionModel | private |
| mActivationVoltage | Kerchoffs2003ContractionModel | privatestatic |
| mDeactivationVoltage | Kerchoffs2003ContractionModel | privatestatic |
| mElectricallyUnactivated | Kerchoffs2003ContractionModel | private |
| mIsActivated | Kerchoffs2003ContractionModel | private |
| mNumberOfStateVariables | AbstractUntemplatedParameterisedSystem | protected |
| mParameters | AbstractParameterisedSystem< std::vector< double > > | protected |
| mpSystemInfo | AbstractUntemplatedParameterisedSystem | protected |
| mSarcomereLength | Kerchoffs2003ContractionModel | private |
| mStateVariables | AbstractParameterisedSystem< std::vector< double > > | protected |
| mTemporaryStateVariables | AbstractOdeBasedContractionModel | protected |
| mTime | AbstractOdeBasedContractionModel | protected |
| mUseAnalyticJacobian | AbstractOdeSystem | protected |
| ResetToInitialConditions() | AbstractParameterisedSystem< std::vector< double > > | virtual |
| rGetConstStateVariables() const | AbstractOdeSystem | |
| rGetDerivedQuantityNames() const | AbstractUntemplatedParameterisedSystem | |
| rGetDerivedQuantityUnits() const | AbstractUntemplatedParameterisedSystem | |
| rGetParameterNames() const | AbstractUntemplatedParameterisedSystem | |
| rGetParameterUnits() const | AbstractUntemplatedParameterisedSystem | |
| rGetStateVariableNames() const | AbstractUntemplatedParameterisedSystem | |
| rGetStateVariables() | AbstractParameterisedSystem< std::vector< double > > | |
| rGetStateVariableUnits() const | AbstractUntemplatedParameterisedSystem | |
| RunAndUpdate(double startTime, double endTime, double timeStep) | AbstractOdeBasedContractionModel | inlinevirtual |
| RunDoNotUpdate(double startTime, double endTime, double timeStep) | AbstractOdeBasedContractionModel | inlinevirtual |
| save(Archive &archive, const unsigned int version) const | AbstractOdeSystem | inlineprivate |
| SetAnyVariable(unsigned index, double value) | AbstractParameterisedSystem< std::vector< double > > | |
| SetAnyVariable(const std::string &rName, double value) | AbstractParameterisedSystem< std::vector< double > > | |
| SetDefaultInitialCondition(unsigned index, double initialCondition) | AbstractParameterisedSystem< std::vector< double > > | |
| SetDefaultInitialConditions(const std::vector< double > &rInitialConditions) | AbstractParameterisedSystem< std::vector< double > > | |
| SetInputParameters(ContractionModelInputParameters &rInputParameters) | Kerchoffs2003ContractionModel | virtual |
| SetParameter(const std::string &rName, double value) | AbstractParameterisedSystem< std::vector< double > > | |
| SetParameter(unsigned index, double value) | AbstractParameterisedSystem< std::vector< double > > | |
| SetStateVariable(unsigned index, double newValue) | AbstractParameterisedSystem< std::vector< double > > | |
| SetStateVariable(const std::string &rName, double newValue) | AbstractParameterisedSystem< std::vector< double > > | |
| SetStateVariables(const std::vector< double > &rStateVariables) | AbstractParameterisedSystem< std::vector< double > > | |
| SetStretch(double stretch) | AbstractContractionModel | inline |
| SetStretchAndStretchRate(double stretch, double stretchRate) | Kerchoffs2003ContractionModel | virtual |
| T0 | Kerchoffs2003ContractionModel | privatestatic |
| TestContractionModels (defined in Kerchoffs2003ContractionModel) | Kerchoffs2003ContractionModel | friend |
| UpdateStateVariables() | AbstractOdeBasedContractionModel | inlinevirtual |
| v0 | Kerchoffs2003ContractionModel | privatestatic |
| VerifyStateVariables() | AbstractParameterisedSystem< std::vector< double > > | inlinevirtual |
| ~AbstractContractionModel() | AbstractContractionModel | inlinevirtual |
| ~AbstractOdeSystem() | AbstractOdeSystem | virtual |
| ~AbstractUntemplatedParameterisedSystem() | AbstractUntemplatedParameterisedSystem | virtual |
1.9.8