LinearSpringWithVariableSpringConstantsForce.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2009
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 #ifndef LINEARSPRINGWITHVARIABLESPRINGCONSTANTSFORCE_HPP
00029 #define LINEARSPRINGWITHVARIABLESPRINGCONSTANTSFORCE_HPP
00030 
00031 #include "GeneralisedLinearSpringForce.hpp"
00032 
00033 #include <boost/serialization/access.hpp>
00034 #include <boost/serialization/base_object.hpp>
00035 
00039 template<unsigned DIM>
00040 class LinearSpringWithVariableSpringConstantsForce : public GeneralisedLinearSpringForce<DIM>
00041 {
00042     friend class TestForces;
00043 
00044 private :
00045 
00047     friend class boost::serialization::access;
00054     template<class Archive>
00055     void serialize(Archive & archive, const unsigned int version)
00056     {
00057         // If Archive is an output archive, then '&' resolves to '<<'
00058         // If Archive is an input archive, then '&' resolves to '>>'
00059         archive & boost::serialization::base_object<GeneralisedLinearSpringForce<DIM> >(*this);
00060         archive & mUseEdgeBasedSpringConstant;
00061         archive & mUseMutantSprings;
00062         archive & mMutantMutantMultiplier;
00063         archive & mNormalMutantMultiplier;
00064         archive & mUseBCatSprings;
00065         archive & mUseApoptoticSprings;
00066     }
00067 
00068 protected :
00069 
00071     bool mUseEdgeBasedSpringConstant;
00072 
00074     bool mUseMutantSprings;
00075 
00077     double mMutantMutantMultiplier;
00078 
00080     double mNormalMutantMultiplier;
00081 
00083     bool mUseBCatSprings;
00084 
00086     bool mUseApoptoticSprings;
00087 
00088 public :
00089 
00093     LinearSpringWithVariableSpringConstantsForce();
00094 
00098     ~LinearSpringWithVariableSpringConstantsForce();
00099 
00105     void SetEdgeBasedSpringConstant(bool useEdgeBasedSpringConstant);
00106 
00115     void SetMutantSprings(bool useMutantSprings, double mutantMutantMultiplier=2, double normalMutantMultiplier=1.5);
00116 
00122     void SetBetaCateninSprings(bool useBCatSprings);
00123 
00129     void SetApoptoticSprings(bool useApoptoticSprings);
00130 
00144     double VariableSpringConstantMultiplicationFactor(unsigned nodeAGlobalIndex,
00145                                                       unsigned nodeBGlobalIndex,
00146                                                       AbstractTissue<DIM>& rTissue,
00147                                                       bool isCloserThanRestLength);
00148 
00155     void AddForceContribution(std::vector<c_vector<double, DIM> >& rForces,
00156                               AbstractTissue<DIM>& rTissue);
00157 
00158 };
00159 
00160 #include "TemplatedExport.hpp"
00161 
00162 EXPORT_TEMPLATE_CLASS_SAME_DIMS(LinearSpringWithVariableSpringConstantsForce)
00163 
00164 
00165 #endif /*LINEARSPRINGWITHVARIABLESPRINGCONSTANTSFORCE_HPP*/

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