, including all inherited members.
| AbstractAssembler() | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline] |
| AbstractLinearAssembler(unsigned numQuadPoints=2) | AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > | |
| AbstractStaticAssembler(unsigned numQuadPoints=2) | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | |
| ApplyDirichletConditions(Vec unusedVector, bool applyToMatrix) | AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| ApplyNeummanBoundaryConditions() | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, protected] |
| AssembleOnElement(Element< ELEMENT_DIM, SPACE_DIM > &rElement, c_matrix< double, PROBLEM_DIM *(ELEMENT_DIM+1), PROBLEM_DIM *(ELEMENT_DIM+1) > &rAElem, c_vector< double, PROBLEM_DIM *(ELEMENT_DIM+1)> &rBElem, bool assembleVector, bool assembleMatrix) | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| AssembleOnSurfaceElement(const BoundaryElement< ELEMENT_DIM-1, SPACE_DIM > &rSurfaceElement, c_vector< double, PROBLEM_DIM *ELEMENT_DIM > &rBSurfElem) | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| AssembleSystem(bool assembleVector, bool assembleMatrix, Vec currentSolutionOrGuess=NULL, double currentTime=0.0) | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| BasisFunction typedef | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected] |
| BidomainRhsMatrixAssembler(AbstractTetrahedralMesh< DIM, DIM > *pMesh) | BidomainRhsMatrixAssembler< DIM > | [inline] |
| ComputeMatrixTerm(c_vector< double, DIM+1 > &rPhi, c_matrix< double, DIM, DIM+1 > &rGradPhi, ChastePoint< DIM > &rX, c_vector< double, 2 > &rU, c_matrix< double, 2, DIM > &rGradU, Element< DIM, DIM > *pElement) | BidomainRhsMatrixAssembler< DIM > | [inline, virtual] |
| AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > >::ComputeMatrixTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, PROBLEM_DIM > &rU, c_matrix< double, PROBLEM_DIM, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement)=0 | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [protected, pure virtual] |
| ComputeTransformedBasisFunctionDerivatives(const ChastePoint< ELEMENT_DIM > &rPoint, const c_matrix< double, ELEMENT_DIM, SPACE_DIM > &rInverseJacobian, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rReturnValue) | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected] |
| ComputeVectorSurfaceTerm(const BoundaryElement< DIM-1, DIM > &rSurfaceElement, c_vector< double, DIM > &rPhi, ChastePoint< DIM > &rX) | BidomainRhsMatrixAssembler< DIM > | [inline, virtual] |
| AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > >::ComputeVectorSurfaceTerm(const BoundaryElement< ELEMENT_DIM-1, SPACE_DIM > &rSurfaceElement, c_vector< double, ELEMENT_DIM > &rPhi, ChastePoint< SPACE_DIM > &rX)=0 | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [protected, pure virtual] |
| ComputeVectorTerm(c_vector< double, DIM+1 > &rPhi, c_matrix< double, DIM, DIM+1 > &rGradPhi, ChastePoint< DIM > &rX, c_vector< double, 2 > &u, c_matrix< double, 2, DIM > &rGradU, Element< DIM, DIM > *pElement) | BidomainRhsMatrixAssembler< DIM > | [inline, virtual] |
| AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > >::ComputeVectorTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, PROBLEM_DIM > &rU, c_matrix< double, PROBLEM_DIM, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement)=0 | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [protected, pure virtual] |
| E_DIM | BidomainRhsMatrixAssembler< DIM > | [static] |
| FinaliseAssembleSystem(Vec currentSolutionOrGuess, double currentTime) | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, protected, virtual] |
| FinaliseLinearSystem(Vec currentSolutionOrGuess, double currentTime, bool assembleVector, bool assembleMatrix) | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, protected, virtual] |
| GetCurrentSolutionOrGuessValue(unsigned nodeIndex, unsigned indexOfUnknown) | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| GetLinearSystem() | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [virtual] |
| GetMatrix() | BidomainRhsMatrixAssembler< DIM > | [inline] |
| IncrementInterpolatedQuantities(double phiI, const Node< SPACE_DIM > *pNode) | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, virtual] |
| InitialiseForSolve(Vec initialSolution) | AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| mCurrentSolutionOrGuessReplicated | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected] |
| mpBoundaryConditions | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [protected] |
| mpLinearSystem | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected] |
| mpMesh | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected] |
| mpQuadRule | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected] |
| mpSurfaceQuadRule | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected] |
| P_DIM | BidomainRhsMatrixAssembler< DIM > | [static] |
| PrepareForAssembleSystem(Vec currentSolutionOrGuess, double currentTime) | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, protected, virtual] |
| PrepareForSolve() | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| ProblemIsNonlinear() | AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| ResetInterpolatedQuantities() | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, virtual] |
| rGetCurrentSolutionOrGuess() | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| S_DIM | BidomainRhsMatrixAssembler< DIM > | [static] |
| SetBoundaryConditionsContainer(BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > *pBoundaryConditions) | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline] |
| SetMatrixIsConst(bool matrixIsConstant=true) | AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| SetMesh(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh) | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | |
| SetNumberOfQuadraturePointsPerDimension(unsigned numQuadPoints) | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | |
| Solve(Vec currentSolutionOrGuess=NULL, double currentTime=0.0) | AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > | [virtual] |
| StaticSolve(Vec currentSolutionOrGuess=NULL, double currentTime=0.0, bool assembleMatrix=true) | AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > | [protected, virtual] |
| SurfaceBasisFunction typedef | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [protected] |
| ~AbstractAssembler() | AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > | [inline, virtual] |
| ~AbstractLinearAssembler() | AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > | |
| ~AbstractStaticAssembler() | AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > | [virtual] |
| ~BidomainRhsMatrixAssembler() | BidomainRhsMatrixAssembler< DIM > | [inline] |
