, including all inherited members.
| AbstractMesh() | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| AbstractTetrahedralMesh() | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| AddExtraBoundaryNodes(BoundaryElement< DIM-1, DIM > *pBoundaryElement, Element< DIM, DIM > *pElement, unsigned nodeIndexOppositeToFace) | QuadraticMesh< DIM > | [inline, private] |
| AddNodesToBoundaryElements() | QuadraticMesh< DIM > | [inline, private] |
| AddNodeToBoundaryElement(BoundaryElement< DIM-1, DIM > *pBoundaryElement, Element< DIM, DIM > *pElement, unsigned internalNode) | QuadraticMesh< DIM > | [inline, private] |
| boost::serialization::access class | TetrahedralMesh< DIM, DIM > | [friend] |
| BoundaryElementIterator typedef | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | |
| BoundaryNodeIterator typedef | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | |
| CalculateBoundaryOfFlaggedRegion() | TetrahedralMesh< DIM, DIM > | |
| Clear() | TetrahedralMesh< DIM, DIM > | [virtual] |
| ConstructCuboid(unsigned width, unsigned height, unsigned depth, bool stagger=false) | TetrahedralMesh< DIM, DIM > | |
| ConstructFromMeshReader(AbstractMeshReader< ELEMENT_DIM, SPACE_DIM > &rMeshReader, bool cullInternalFaces=false) | TetrahedralMesh< DIM, DIM > | [virtual] |
| ConstructLinearMesh(unsigned width) | TetrahedralMesh< DIM, DIM > | |
| ConstructRectangularMesh(unsigned width, unsigned height, bool stagger=true) | TetrahedralMesh< DIM, DIM > | |
| EdgesBegin() | TetrahedralMesh< DIM, DIM > | |
| EdgesEnd() | TetrahedralMesh< DIM, DIM > | |
| FlagElementsNotContainingNodes(std::set< unsigned > nodes) | TetrahedralMesh< DIM, DIM > | |
| GetAngleBetweenNodes(unsigned indexA, unsigned indexB) | TetrahedralMesh< DIM, DIM > | |
| GetBoundaryElement(unsigned index) const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetBoundaryElementIteratorBegin() const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetBoundaryElementIteratorEnd() const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetBoundaryNodeIteratorBegin() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetBoundaryNodeIteratorEnd() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetContainingElementIndex(ChastePoint< SPACE_DIM > testPoint, bool strict=false, std::set< unsigned > testElements=std::set< unsigned >()) | TetrahedralMesh< DIM, DIM > | |
| GetContainingElementIndices(ChastePoint< SPACE_DIM > testPoint) | TetrahedralMesh< DIM, DIM > | |
| GetDistanceBetweenNodes(unsigned indexA, unsigned indexB) | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetDistributedVectorFactory() | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetElement(unsigned index) const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetElementIteratorBegin(bool skipDeletedElements=true) | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetElementIteratorEnd() | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetInverseJacobianForElement(unsigned elementIndex, c_matrix< double, SPACE_DIM, ELEMENT_DIM > &rJacobian, double &rJacobianDeterminant, c_matrix< double, ELEMENT_DIM, SPACE_DIM > &rInverseJacobian) const | TetrahedralMesh< DIM, DIM > | [virtual] |
| GetJacobianForElement(unsigned elementIndex, c_matrix< double, SPACE_DIM, SPACE_DIM > &rJacobian, double &rJacobianDeterminant) const | TetrahedralMesh< DIM, DIM > | [virtual] |
| GetMeshFileBaseName() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNearestElementIndex(ChastePoint< SPACE_DIM > testPoint) | TetrahedralMesh< DIM, DIM > | |
| GetNode(unsigned index) const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNodeIteratorBegin(bool skipDeletedNodes=true) | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNodeIteratorEnd() | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumAllBoundaryElements() const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumAllElements() const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumAllNodes() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumBoundaryElements() const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetNumBoundaryNodes() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumElements() const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetNumNodes() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetNumVertices() | QuadraticMesh< DIM > | [inline] |
| GetSurfaceArea() | TetrahedralMesh< DIM, DIM > | |
| GetVectorFromAtoB(const c_vector< double, SPACE_DIM > &rLocationA, const c_vector< double, SPACE_DIM > &rLocationB) | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetVolume() | TetrahedralMesh< DIM, DIM > | |
| GetWeightedDirectionForBoundaryElement(unsigned elementIndex, c_vector< double, SPACE_DIM > &rWeightedDirection, double &rJacobianDeterminant) const | TetrahedralMesh< DIM, DIM > | [virtual] |
| GetWeightedDirectionForElement(unsigned elementIndex, c_vector< double, SPACE_DIM > &rWeightedDirection, double &rJacobianDeterminant) const | TetrahedralMesh< DIM, DIM > | [virtual] |
| GetWidth(const unsigned &rDimension) const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetWidthExtremes(const unsigned &rDimension) const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| HelperMethod1(unsigned boundaryElemNode0, unsigned boundaryElemNode1, Element< DIM, DIM > *pElement, unsigned node0, unsigned node1, unsigned node2, unsigned &rOffset, bool &rReverse) | QuadraticMesh< DIM > | [inline, private] |
| HelperMethod2(BoundaryElement< DIM-1, DIM > *pBoundaryElement, Element< DIM, DIM > *pElement, unsigned internalNode0, unsigned internalNode1, unsigned internalNode2, unsigned offset, bool reverse) | QuadraticMesh< DIM > | [inline, private] |
| IsMeshChanging() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| LoadFromFile(const std::string &rFileName, bool boundaryElemFileIsQuadratic) | QuadraticMesh< DIM > | [inline, private] |
| mBoundaryElementJacobianDeterminants | TetrahedralMesh< DIM, DIM > | [protected] |
| mBoundaryElements | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mBoundaryElementWeightedDirections | TetrahedralMesh< DIM, DIM > | [protected] |
| mBoundaryNodes | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mElementInverseJacobians | TetrahedralMesh< DIM, DIM > | [protected] |
| mElementJacobianDeterminants | TetrahedralMesh< DIM, DIM > | [protected] |
| mElementJacobians | TetrahedralMesh< DIM, DIM > | [protected] |
| mElements | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mElementWeightedDirections | TetrahedralMesh< DIM, DIM > | [protected] |
| mIsInternalNode | QuadraticMesh< DIM > | [private] |
| mMeshChangesDuringSimulation | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mMeshFileBaseName | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mNodes | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mNodesPermutation | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mNumVertices | QuadraticMesh< DIM > | [private] |
| mpDistributedVectorFactory | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| PermuteNodes() | TetrahedralMesh< DIM, DIM > | [virtual] |
| PermuteNodes(std::vector< unsigned > &perm) | TetrahedralMesh< DIM, DIM > | |
| PermuteNodesWithMetisBinaries(unsigned numProcs) | TetrahedralMesh< DIM, DIM > | |
| QuadraticMesh(const std::string &rFileName, bool boundaryElemFileIsQuadratic) | QuadraticMesh< DIM > | [inline] |
| QuadraticMesh(double xEnd, double yEnd, unsigned numElemX, unsigned numElemY) | QuadraticMesh< DIM > | [inline] |
| QuadraticMesh(double xEnd, double yEnd, double zEnd, unsigned numElemX, unsigned numElemY, unsigned numElemZ) | QuadraticMesh< DIM > | [inline] |
| ReadNodesPerProcessorFile(const std::string &rNodesPerProcessorFile) | TetrahedralMesh< DIM, DIM > | [virtual] |
| RefreshJacobianCachedData() | TetrahedralMesh< DIM, DIM > | [virtual] |
| RefreshMesh() | TetrahedralMesh< DIM, DIM > | [virtual] |
| rGetNodePermutation() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| Rotate(c_matrix< double, SPACE_DIM, SPACE_DIM > rotationMatrix) | TetrahedralMesh< DIM, DIM > | |
| Rotate(c_vector< double, 3 > axis, double angle) | TetrahedralMesh< DIM, DIM > | |
| Rotate(double theta) | TetrahedralMesh< DIM, DIM > | |
| RotateX(const double theta) | TetrahedralMesh< DIM, DIM > | |
| RotateY(const double theta) | TetrahedralMesh< DIM, DIM > | |
| RotateZ(const double theta) | TetrahedralMesh< DIM, DIM > | |
| RunMesherAndReadMesh(std::string binary, std::string outputDir, std::string fileStem) | QuadraticMesh< DIM > | [inline, private] |
| Scale(const double xFactor=1.0, const double yFactor=1.0, const double zFactor=1.0) | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetElementOwnerships(unsigned lo, unsigned hi) | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| SolveBoundaryElementMapping(unsigned index) const | TetrahedralMesh< DIM, DIM > | [protected, virtual] |
| SolveElementMapping(unsigned index) const | TetrahedralMesh< DIM, DIM > | [protected, virtual] |
| SolveNodeMapping(unsigned index) const | TetrahedralMesh< DIM, DIM > | [protected, virtual] |
| TetrahedralMesh() | TetrahedralMesh< DIM, DIM > | |
| TetrahedralMesh(unsigned numElements) | TetrahedralMesh< DIM, DIM > | |
| Translate(c_vector< double, SPACE_DIM > displacement) | TetrahedralMesh< DIM, DIM > | |
| Translate(const double xMovement=0.0, const double yMovement=0.0, const double zMovement=0.0) | TetrahedralMesh< DIM, DIM > | |
| UnflagAllElements() | TetrahedralMesh< DIM, DIM > | |
| WriteBoundaryElementFile(std::string directory, std::string fileName) | QuadraticMesh< DIM > | [inline] |
| ~AbstractMesh() | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| ~AbstractTetrahedralMesh() | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
