StochasticDurationGenerationBasedCellCycleModel.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2009
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 #ifndef STOCHASTICCELLCYCLEMODEL_HPP_
00029 #define STOCHASTICCELLCYCLEMODEL_HPP_
00030 
00031 #include <cassert>
00032 #include <iostream>
00033 
00034 #include "AbstractSimpleGenerationBasedCellCycleModel.hpp"
00035 #include "RandomNumberGenerator.hpp"
00036 #include "Exception.hpp"
00037 
00042 class StochasticDurationGenerationBasedCellCycleModel : public AbstractSimpleGenerationBasedCellCycleModel
00043 {
00044 private:
00045 
00047     friend class boost::serialization::access;
00054     template<class Archive>
00055     void serialize(Archive & archive, const unsigned int version)
00056     {
00057         archive & boost::serialization::base_object<AbstractSimpleGenerationBasedCellCycleModel>(*this);
00058 
00059         RandomNumberGenerator* p_gen = RandomNumberGenerator::Instance();
00060         archive & *p_gen;
00061         archive & p_gen;
00062     }
00063 
00069     void SetG1Duration();
00070 
00077     StochasticDurationGenerationBasedCellCycleModel(double g1Duration, unsigned generation);
00078 
00079 public:
00080 
00085     StochasticDurationGenerationBasedCellCycleModel()
00086     {}
00087 
00092     AbstractCellCycleModel* CreateDaughterCellCycleModel();
00093 
00094 };
00095 
00096 // Declare identifier for the serializer
00097 BOOST_CLASS_EXPORT(StochasticDurationGenerationBasedCellCycleModel)
00098 
00099 
00100 #endif /*STOCHASTICCELLCYCLEMODEL_HPP_*/

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