FakeBathCell.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2010
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 #ifndef FAKEBATHCELL_HPP_
00029 #define FAKEBATHCELL_HPP_
00030 
00031 #include "ChasteSerialization.hpp"
00032 #include <boost/serialization/base_object.hpp>
00033 
00034 #include "AbstractCardiacCell.hpp"
00035 #include "AbstractStimulusFunction.hpp"
00036 #include <vector>
00037 
00045 class FakeBathCell : public AbstractCardiacCell
00046 {
00047 private:
00049     friend class boost::serialization::access;
00056     template<class Archive>
00057     void serialize(Archive & archive, const unsigned int version)
00058     {
00059         archive & boost::serialization::base_object<AbstractCardiacCell>(*this);
00060     }
00061 
00062 public:
00069     FakeBathCell(boost::shared_ptr<AbstractIvpOdeSolver> pSolver,
00070                  boost::shared_ptr<AbstractStimulusFunction> pIntracellularStimulus);
00071 
00075     ~FakeBathCell();
00076 
00085     void EvaluateYDerivatives(double time, const std::vector<double> &rY, std::vector<double> &rDY);
00086 
00090     double GetIIonic();
00091 
00098     void ComputeExceptVoltage(double tStart, double tEnd);
00099 };
00100 
00101 
00102 #include "SerializationExportWrapper.hpp"
00103 CHASTE_CLASS_EXPORT(FakeBathCell);
00104 
00105 namespace boost
00106 {
00107 namespace serialization
00108 {
00112 template<class Archive>
00113 inline void save_construct_data(
00114     Archive & ar, const FakeBathCell * t, const unsigned int file_version)
00115 {
00116     const boost::shared_ptr<AbstractIvpOdeSolver> p_solver = t->GetSolver();
00117     const boost::shared_ptr<AbstractStimulusFunction> p_stimulus = t->GetStimulusFunction();
00118     ar << p_solver;
00119     ar << p_stimulus;
00120 }
00121 
00126 template<class Archive>
00127 inline void load_construct_data(
00128     Archive & ar, FakeBathCell * t, const unsigned int file_version)
00129 {
00130 
00131     boost::shared_ptr<AbstractIvpOdeSolver> p_solver;
00132     boost::shared_ptr<AbstractStimulusFunction> p_stimulus;
00133     ar >> p_solver;
00134     ar >> p_stimulus;
00135     ::new(t)FakeBathCell(p_solver, p_stimulus);
00136 }
00137 }
00138 } // namespace ...
00139 
00140 
00141 #endif /*FAKEBATHCELL_HPP_*/

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