, including all inherited members.
| AbstractMesh() | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| AbstractTetrahedralMesh() | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| AddNode(Node< 2 > *pNewNode) | Cylindrical2dMesh | |
| MutableMesh< 2, 2 >::AddNode(Node< SPACE_DIM > *pNewNode) | MutableMesh< 2, 2 > | [virtual] |
| boost::serialization::access class | Cylindrical2dMesh | [friend] |
| BoundaryElementIterator typedef | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | |
| BoundaryNodeIterator typedef | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | |
| CalculateBoundaryOfFlaggedRegion() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| CalculateDesignatedOwnershipOfBoundaryElement(unsigned faceIndex) | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| CalculateDesignatedOwnershipOfElement(unsigned elementIndex) | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| CheckIsConforming() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| CheckIsVoronoi(double maxPenetration=0.0) | MutableMesh< 2, 2 > | |
| Clear() | MutableMesh< 2, 2 > | [virtual] |
| ConstructCuboid(unsigned width, unsigned height, unsigned depth) | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| ConstructFromMeshReader(AbstractMeshReader< ELEMENT_DIM, SPACE_DIM > &rMeshReader) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| ConstructLinearMesh(unsigned width) | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| ConstructRectangularMesh(unsigned width, unsigned height, bool stagger=true) | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| CorrectNonPeriodicMesh() | Cylindrical2dMesh | [private] |
| CreateHaloNodes() | Cylindrical2dMesh | [private] |
| CreateMirrorNodes() | Cylindrical2dMesh | [private] |
| Cylindrical2dMesh(double width) | Cylindrical2dMesh | |
| Cylindrical2dMesh(double width, std::vector< Node< 2 > * > nodes) | Cylindrical2dMesh | |
| DeleteBoundaryNodeAt(unsigned index) | MutableMesh< 2, 2 > | |
| DeleteHaloNodes() | Cylindrical2dMesh | [private] |
| DeleteNode(unsigned index) | MutableMesh< 2, 2 > | |
| DeleteNodePriorToReMesh(unsigned index) | MutableMesh< 2, 2 > | |
| EdgesBegin() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| EdgesEnd() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| FlagElementsNotContainingNodes(const std::set< unsigned > rNodes) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GenerateVectorsOfElementsStraddlingPeriodicBoundaries() | Cylindrical2dMesh | [private] |
| GetAngleBetweenNodes(unsigned indexA, unsigned indexB) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetBoundaryElement(unsigned index) const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetBoundaryElementIteratorBegin() const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetBoundaryElementIteratorEnd() const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetBoundaryNodeIteratorBegin() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetBoundaryNodeIteratorEnd() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetContainingElementIndex(ChastePoint< SPACE_DIM > testPoint, bool strict=false, std::set< unsigned > testElements=std::set< unsigned >(), bool onlyTryWithTestElements=false) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetContainingElementIndexWithInitialGuess(ChastePoint< SPACE_DIM > testPoint, unsigned startingElementGuess, bool strict=false) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetContainingElementIndices(ChastePoint< SPACE_DIM > testPoint) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetCorrespondingNodeIndex(unsigned nodeIndex) | Cylindrical2dMesh | [private] |
| GetDistanceBetweenNodes(unsigned indexA, unsigned indexB) | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetDistributedVectorFactory() | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetElement(unsigned index) const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetElementIteratorBegin(bool skipDeletedElements=true) | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetElementIteratorEnd() | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetInverseJacobianForElement(unsigned elementIndex, c_matrix< double, SPACE_DIM, ELEMENT_DIM > &rJacobian, double &rJacobianDeterminant, c_matrix< double, ELEMENT_DIM, SPACE_DIM > &rInverseJacobian) const | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetJacobianForElement(unsigned elementIndex, c_matrix< double, SPACE_DIM, SPACE_DIM > &rJacobian, double &rJacobianDeterminant) const | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetMeshFileBaseName() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNearestElementIndex(ChastePoint< SPACE_DIM > testPoint) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNearestElementIndexFromTestElements(ChastePoint< SPACE_DIM > testPoint, std::set< unsigned > testElements) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNode(unsigned index) const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNodeFromPrePermutationIndex(unsigned index) const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNodeIteratorBegin(bool skipDeletedNodes=true) | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNodeIteratorEnd() | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumAllBoundaryElements() const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumAllElements() const | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumAllNodes() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetNumBoundaryElements() const | MutableMesh< 2, 2 > | [virtual] |
| GetNumBoundaryNodes() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetNumElements() const | MutableMesh< 2, 2 > | [virtual] |
| GetNumNodes() const | MutableMesh< 2, 2 > | [virtual] |
| GetSurfaceArea() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetVectorFromAtoB(const c_vector< double, 2 > &rLocation1, const c_vector< double, 2 > &rLocation2) | Cylindrical2dMesh | |
| MutableMesh< 2, 2 >::GetVectorFromAtoB(const c_vector< double, SPACE_DIM > &rLocationA, const c_vector< double, SPACE_DIM > &rLocationB) | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetVolume() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| GetWeightedDirectionForBoundaryElement(unsigned elementIndex, c_vector< double, SPACE_DIM > &rWeightedDirection, double &rJacobianDeterminant) const | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetWeightedDirectionForElement(unsigned elementIndex, c_vector< double, SPACE_DIM > &rWeightedDirection, double &rJacobianDeterminant) const | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| GetWidth(const unsigned &rDimension) const | Cylindrical2dMesh | [virtual] |
| GetWidthExtremes(const unsigned &rDimension) const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| IsMeshChanging() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| mAddedNodes | MutableMesh< 2, 2 > | [protected] |
| mBottom | Cylindrical2dMesh | [private] |
| mBottomHaloNodes | Cylindrical2dMesh | [private] |
| mBoundaryElementJacobianDeterminants | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mBoundaryElements | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mBoundaryElementWeightedDirections | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mBoundaryNodes | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mDeletedBoundaryElementIndices | MutableMesh< 2, 2 > | [protected] |
| mDeletedElementIndices | MutableMesh< 2, 2 > | [protected] |
| mDeletedNodeIndices | MutableMesh< 2, 2 > | [protected] |
| mElementInverseJacobians | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mElementJacobianDeterminants | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mElementJacobians | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mElements | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mElementWeightedDirections | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mImageToLeftOriginalNodeMap | Cylindrical2dMesh | [private] |
| mImageToRightOriginalNodeMap | Cylindrical2dMesh | [private] |
| mLeftImages | Cylindrical2dMesh | [private] |
| mLeftOriginals | Cylindrical2dMesh | [private] |
| mLeftPeriodicBoundaryElementIndices | Cylindrical2dMesh | [private] |
| mMeshChangesDuringSimulation | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mMeshFileBaseName | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mMeshIsLinear | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mNodes | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mNodesPermutation | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| MoveMergeNode(unsigned index, unsigned targetIndex, bool concreteMove=true) | MutableMesh< 2, 2 > | |
| mpDistributedVectorFactory | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mRightImages | Cylindrical2dMesh | [private] |
| mRightOriginals | Cylindrical2dMesh | [private] |
| mRightPeriodicBoundaryElementIndices | Cylindrical2dMesh | [private] |
| mTop | Cylindrical2dMesh | [private] |
| mTopHaloNodes | Cylindrical2dMesh | [private] |
| MutableMesh() | MutableMesh< 2, 2 > | |
| MutableMesh(std::vector< Node< SPACE_DIM > * > nodes) | MutableMesh< 2, 2 > | |
| mWidth | Cylindrical2dMesh | [private] |
| PermuteNodes() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| PermuteNodes(std::vector< unsigned > &perm) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| PermuteNodesWithMetisBinaries(unsigned numProcs) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| ReadNodesPerProcessorFile(const std::string &rNodesPerProcessorFile) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| ReconstructCylindricalMesh() | Cylindrical2dMesh | [private] |
| RefineElement(Element< ELEMENT_DIM, SPACE_DIM > *pElement, ChastePoint< SPACE_DIM > point) | MutableMesh< 2, 2 > | |
| RefreshJacobianCachedData() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| RefreshMesh() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| ReIndex(NodeMap &map) | MutableMesh< 2, 2 > | |
| ReMesh(NodeMap &map) | Cylindrical2dMesh | [virtual] |
| MutableMesh< 2, 2 >::ReMesh() | MutableMesh< 2, 2 > | |
| RescaleMeshFromBoundaryNode(ChastePoint< 1 > updatedPoint, unsigned boundaryNodeIndex) | MutableMesh< 2, 2 > | |
| rGetNodePermutation() const | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| Rotate(c_matrix< double, SPACE_DIM, SPACE_DIM > rotationMatrix) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| Rotate(c_vector< double, 3 > axis, double angle) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| Rotate(double theta) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| RotateX(const double theta) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| RotateY(const double theta) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| RotateZ(const double theta) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| Scale(const double xFactor=1.0, const double yFactor=1.0, const double zFactor=1.0) | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| serialize(Archive &archive, const unsigned int version) | Cylindrical2dMesh | [inline, private] |
| SetDistributedVectorFactory(DistributedVectorFactory *pFactory) | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| SetElementOwnerships(unsigned lo, unsigned hi) | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| SetMeshHasChangedSinceLoading() | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| SetNode(unsigned index, ChastePoint< 2 > point, bool concreteMove) | Cylindrical2dMesh | |
| MutableMesh< 2, 2 >::SetNode(unsigned index, ChastePoint< SPACE_DIM > point, bool concreteMove=true) | MutableMesh< 2, 2 > | [virtual] |
| SolveBoundaryElementMapping(unsigned index) const | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| SolveElementMapping(unsigned index) const | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| SolveNodeMapping(unsigned index) const | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| TestCylindrical2dMesh (defined in Cylindrical2dMesh) | Cylindrical2dMesh | [friend] |
| TetrahedralMesh() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| Translate(const c_vector< double, SPACE_DIM > &rDisplacement) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| Translate(const double xMovement=0.0, const double yMovement=0.0, const double zMovement=0.0) | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| UnflagAllElements() | TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline] |
| UpdateTopAndBottom() | Cylindrical2dMesh | [private] |
| UseTheseElementsToDecideMeshing(std::set< unsigned > &rMainSideElements) | Cylindrical2dMesh | [private] |
| ~AbstractMesh() | AbstractMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| ~AbstractTetrahedralMesh() | AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > | [inline, virtual] |
| ~Cylindrical2dMesh() | Cylindrical2dMesh | |
| ~MutableMesh() | MutableMesh< 2, 2 > | [virtual] |
