, including all inherited members.
AddCellKiller(AbstractCellKiller< DIM > *pCellKiller) | CellBasedSimulation< 1 > | |
AddCellPopulationBoundaryCondition(AbstractCellPopulationBoundaryCondition< DIM > *pBoundaryCondition) | CellBasedSimulation< 1 > | |
AddForce(AbstractForce< DIM > *pForce) | CellBasedSimulation< 1 > | |
AfterSolve() | CellBasedSimulation< 1 > | [inline, protected, virtual] |
ApplyCellPopulationBoundaryConditions(const std::vector< c_vector< double, 1 > > &rOldLocations) | CryptSimulation1d | |
CellBasedSimulation< 1 >::ApplyCellPopulationBoundaryConditions(const std::vector< c_vector< double, DIM > > &rOldLocations) | CellBasedSimulation< 1 > | [inline, protected, virtual] |
boost::serialization::access class | CryptSimulation1d | [friend] |
CalculateCellDivisionVector(CellPtr pParentCell) | CryptSimulation1d | [private, virtual] |
CellBasedSimulation(AbstractCellPopulation< DIM > &rCellPopulation, bool deleteCellPopulationAndForceCollection=false, bool initialiseCells=true) | CellBasedSimulation< 1 > | |
CryptSimulation1d(AbstractCellPopulation< 1 > &rCellPopulation, bool deleteCellPopulationAndForceCollection=false, bool initialiseCells=true) | CryptSimulation1d | |
DoCellBirth() | CellBasedSimulation< 1 > | [protected, virtual] |
DoCellRemoval() | CellBasedSimulation< 1 > | [protected] |
GetDt() | CellBasedSimulation< 1 > | |
GetIdentifier() const | Identifiable | |
GetNodeLocation(const unsigned &rNodeIndex) | CellBasedSimulation< 1 > | |
GetNumBirths() | CellBasedSimulation< 1 > | |
GetNumDeaths() | CellBasedSimulation< 1 > | |
GetOutputDirectory() | CellBasedSimulation< 1 > | |
GetOutputNodeVelocities() | CellBasedSimulation< 1 > | |
mBoundaryConditions | CellBasedSimulation< 1 > | [protected] |
mCellKillers | CellBasedSimulation< 1 > | [protected] |
mDeleteCellPopulationAndForcesAndBCsInDestructor | CellBasedSimulation< 1 > | [protected] |
mDt | CellBasedSimulation< 1 > | [protected] |
mEndTime | CellBasedSimulation< 1 > | [protected] |
mForceCollection | CellBasedSimulation< 1 > | [protected] |
mInitialiseCells | CellBasedSimulation< 1 > | [protected] |
mNoBirth | CellBasedSimulation< 1 > | [protected] |
mNumBirths | CellBasedSimulation< 1 > | [protected] |
mNumDeaths | CellBasedSimulation< 1 > | [protected] |
mOutputDirectory | CellBasedSimulation< 1 > | [protected] |
mOutputNodeVelocities | CellBasedSimulation< 1 > | [protected] |
mpNodeVelocitiesFile | CellBasedSimulation< 1 > | [protected] |
mpRandomGenerator | CellBasedSimulation< 1 > | [protected] |
mpStaticCastCellPopulation | CryptSimulation1d | [private] |
mpVizSetupFile | CellBasedSimulation< 1 > | [protected] |
mrCellPopulation | CellBasedSimulation< 1 > | [protected] |
mSamplingTimestepMultiple | CellBasedSimulation< 1 > | [protected] |
mSimulationOutputDirectory | CellBasedSimulation< 1 > | [protected] |
mUpdateCellPopulation | CellBasedSimulation< 1 > | [protected] |
OutputSimulationParameters(out_stream &rParamsFile) | CryptSimulation1d | [virtual] |
OutputSimulationSetup() | CellBasedSimulation< 1 > | [protected] |
PostSolve() | CellBasedSimulation< 1 > | [inline, protected, virtual] |
rGetCellPopulation() | CellBasedSimulation< 1 > | |
rGetCellPopulation() const | CellBasedSimulation< 1 > | |
serialize(Archive &archive, const unsigned int version) | CryptSimulation1d | [inline, private] |
SetDt(double dt) | CellBasedSimulation< 1 > | |
SetEndTime(double endTime) | CellBasedSimulation< 1 > | |
SetNoBirth(bool noBirth) | CellBasedSimulation< 1 > | |
SetOutputDirectory(std::string outputDirectory) | CellBasedSimulation< 1 > | |
SetOutputNodeVelocities(bool outputNodeVelocities) | CellBasedSimulation< 1 > | |
SetSamplingTimestepMultiple(unsigned samplingTimestepMultiple) | CellBasedSimulation< 1 > | |
SetUpdateCellPopulationRule(bool updateCellPopulation) | CellBasedSimulation< 1 > | |
SetupSolve() | CellBasedSimulation< 1 > | [inline, protected, virtual] |
Solve() | CellBasedSimulation< 1 > | |
StoppingEventHasOccurred() | CellBasedSimulation< 1 > | [protected, virtual] |
TestCryptSimulation1d (defined in CryptSimulation1d) | CryptSimulation1d | [friend] |
UpdateCellPopulation() | CellBasedSimulation< 1 > | [protected] |
UpdateNodePositions(const std::vector< c_vector< double, DIM > > &rNodeForces) | CellBasedSimulation< 1 > | [protected, virtual] |
WriteVisualizerSetupFile() | CellBasedSimulation< 1 > | [inline, protected, virtual] |
~CellBasedSimulation() | CellBasedSimulation< 1 > | [virtual] |
~Identifiable() | Identifiable | [virtual] |