| AbstractCardiacProblem(AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM > *pCellFactory) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| AbstractCardiacProblem() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| AddOutputModifier(boost::shared_ptr< AbstractOutputModifier > pOutputModifier) | AbstractCardiacProblem< DIM, DIM, 2 > | inline |
| AnalyseMeshForBath() | BidomainProblem< DIM > | protected |
| AtBeginningOfTimestep(double time) | BidomainProblem< DIM > | virtual |
| BidomainProblem(AbstractCardiacCellFactory< DIM > *pCellFactory, bool hasBath=false) | BidomainProblem< DIM > | |
| BidomainProblem() | BidomainProblem< DIM > | |
| boost::serialization::access class | BidomainProblem< DIM > | friend |
| CloseFilesAndPostProcess() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| CreateCardiacTissue() | BidomainProblem< DIM > | protectedvirtual |
| CreateInitialCondition() | BidomainProblem< DIM > | protectedvirtual |
| CreateMeshFromHeartConfig() | AbstractCardiacProblem< DIM, DIM, 2 > | protectedvirtual |
| CreateSolver() | BidomainProblem< DIM > | protectedvirtual |
| DefineExtraVariablesWriterColumns(bool extending) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| DefineWriterColumns(bool extending) | BidomainProblem< DIM > | virtual |
| GetBidomainTissue() | BidomainProblem< DIM > | |
| GetCurrentTime() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| GetDataReader() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| GetHasBath() | BidomainProblem< DIM > | virtual |
| GetSolution() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| GetSolutionDistributedVector() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| GetTissue() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| Initialise() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| InitialiseWriter() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| load(Archive &archive, const unsigned int version) | BidomainProblem< DIM > | inlineprivate |
| LoadExtraArchive(Archive &archive, unsigned version) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| LoadExtraArchiveForBidomain(Archive &archive, unsigned version) | BidomainProblem< DIM > | |
| mAllocatedMemoryForMesh | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mCurrentTime | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mExtracelluarColumnId | BidomainProblem< DIM > | protected |
| mExtraVariablesId | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mFixedExtracellularPotentialNodes | BidomainProblem< DIM > | protected |
| mHasBath | BidomainProblem< DIM > | protected |
| mHdf5DataWriterChunkSizeAndAlignment | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mMeshFilename | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mNodeColumnId | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mNodesToOutput | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mOutputModifiers | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mpBidomainTissue | BidomainProblem< DIM > | protected |
| mpBoundaryConditionsContainer | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mpCardiacTissue | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mpCellFactory | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mpDefaultBoundaryConditionsContainer | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mpElectrodes | BidomainProblem< DIM > | protected |
| mpMesh | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mPrintOutput | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mpSolver | BidomainProblem< DIM > | protected |
| mpTimeAdaptivityController | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mpWriter | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mRowForAverageOfPhiZeroed | BidomainProblem< DIM > | protected |
| mSolution | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mTimeColumnId | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mUseHdf5DataWriterCache | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mVoltageColumnId | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| mWriteInfo | AbstractCardiacProblem< DIM, DIM, 2 > | protected |
| OnEndOfTimestep(double time) | BidomainProblem< DIM > | virtual |
| PreSolveChecks() | BidomainProblem< DIM > | virtual |
| PrintOutput(bool rPrintOutput) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| rGetMesh() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| save(Archive &archive, const unsigned int version) const | BidomainProblem< DIM > | inlineprivate |
| SetBoundaryConditionsContainer(BccType pBcc) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| SetElectrodes() | BidomainProblem< DIM > | virtual |
| SetFixedExtracellularPotentialNodes(std::vector< unsigned > nodes) | BidomainProblem< DIM > | |
| SetHdf5DataWriterTargetChunkSizeAndAlignment(hsize_t size) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| SetMesh(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| SetNodeForAverageOfPhiZeroed(unsigned node) | BidomainProblem< DIM > | |
| SetNodesPerProcessorFilename(const std::string &rFilename) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| SetOutputNodes(std::vector< unsigned > &rNodesToOutput) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| SetUpAdditionalStoppingTimes(std::vector< double > &rAdditionalStoppingTimes) | BidomainProblem< DIM > | virtual |
| SetUseHdf5DataWriterCache(bool useCache=true) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| SetUseTimeAdaptivityController(bool useAdaptivity, AbstractTimeAdaptivityController *pController=NULL) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| SetWriteInfo(bool writeInfo=true) | AbstractCardiacProblem< DIM, DIM, 2 > | |
| Solve() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| TestBidomainWithBathProblem (defined in BidomainProblem< DIM >) | BidomainProblem< DIM > | friend |
| TestCardiacSimulationArchiver (defined in BidomainProblem< DIM >) | BidomainProblem< DIM > | friend |
| TestPCTwoLevelsBlockDiagonal (defined in BidomainProblem< DIM >) | BidomainProblem< DIM > | friend |
| WriteExtraVariablesOneStep() | AbstractCardiacProblem< DIM, DIM, 2 > | |
| WriteInfo(double time) | BidomainProblem< DIM > | virtual |
| WriteOneStep(double time, Vec voltageVec) | BidomainProblem< DIM > | virtual |
| ~AbstractCardiacProblem() | AbstractCardiacProblem< DIM, DIM, 2 > | virtual |
| ~AbstractUntemplatedCardiacProblem() | AbstractUntemplatedCardiacProblem | inlinevirtual |
1.8.6