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Goldbeter1991SrnModel Member List
This is the complete list of members for
Goldbeter1991SrnModel
, including all inherited members.
AbstractOdeSrnModel
(const AbstractOdeSrnModel &rModel)
AbstractOdeSrnModel
protected
AbstractOdeSrnModel
(unsigned stateSize, boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())
AbstractOdeSrnModel
AbstractSrnModel
(const AbstractSrnModel &rModel)
AbstractSrnModel
protected
AbstractSrnModel
()
AbstractSrnModel
AdjustOdeParameters
(double currentTime)
CellCycleModelOdeHandler
protected
virtual
boost::serialization::access
class
Goldbeter1991SrnModel
friend
CellCycleModelOdeHandler
(const CellCycleModelOdeHandler &rHandler)
CellCycleModelOdeHandler
protected
CellCycleModelOdeHandler
(double lastTime=SimulationTime::Instance() ->GetTime(), boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())
CellCycleModelOdeHandler
CreateSrnModel
()
Goldbeter1991SrnModel
virtual
GetC
()
Goldbeter1991SrnModel
GetCell
()
AbstractSrnModel
GetDt
()
CellCycleModelOdeHandler
GetIdentifier
() const
Identifiable
GetM
()
Goldbeter1991SrnModel
GetOdeSolver
() const
CellCycleModelOdeHandler
GetOdeSystem
() const
CellCycleModelOdeHandler
GetProteinConcentrations
() const
CellCycleModelOdeHandler
GetSimulatedToTime
() const
AbstractSrnModel
GetX
()
Goldbeter1991SrnModel
Goldbeter1991SrnModel
(const Goldbeter1991SrnModel &rModel)
Goldbeter1991SrnModel
protected
Goldbeter1991SrnModel
(boost::shared_ptr< AbstractCellCycleModelOdeSolver > pOdeSolver=boost::shared_ptr< AbstractCellCycleModelOdeSolver >())
Goldbeter1991SrnModel
Initialise
()
Goldbeter1991SrnModel
virtual
AbstractOdeSrnModel::Initialise
(AbstractOdeSystem *pOdeSystem)
AbstractOdeSrnModel
protected
InitialiseDaughterCell
()
AbstractSrnModel
virtual
mDt
CellCycleModelOdeHandler
protected
mFinishedRunningOdes
CellCycleModelOdeHandler
protected
mInitialConditions
AbstractOdeSrnModel
protected
mLastTime
CellCycleModelOdeHandler
protected
mpCell
AbstractSrnModel
protected
mpOdeSolver
CellCycleModelOdeHandler
protected
mpOdeSystem
CellCycleModelOdeHandler
protected
mSimulatedToTime
AbstractSrnModel
protected
mStateSize
AbstractOdeSrnModel
protected
OutputSrnModelInfo
(out_stream &rParamsFile)
AbstractSrnModel
OutputSrnModelParameters
(out_stream &rParamsFile)
Goldbeter1991SrnModel
virtual
ResetForDivision
()
AbstractOdeSrnModel
virtual
serialize
(Archive &archive, const unsigned int version)
Goldbeter1991SrnModel
inline
private
SetCell
(CellPtr pCell)
AbstractSrnModel
SetDt
(double timeStep)
CellCycleModelOdeHandler
SetInitialConditions
(std::vector< double > initialConditions)
AbstractOdeSrnModel
SetLastTime
(double lastTime)
CellCycleModelOdeHandler
SetOdeSystem
(AbstractOdeSystem *pOdeSystem)
CellCycleModelOdeHandler
SetProteinConcentrationsForTestsOnly
(double lastTime, std::vector< double > proteinConcentrations)
CellCycleModelOdeHandler
SetSimulatedToTime
(double simulatedToTime)
AbstractSrnModel
SetStateVariables
(const std::vector< double > &rStateVariables)
CellCycleModelOdeHandler
SimulateToCurrentTime
()
Goldbeter1991SrnModel
virtual
SolveOdeToTime
(double currentTime)
CellCycleModelOdeHandler
protected
~AbstractOdeSrnModel
()
AbstractOdeSrnModel
virtual
~AbstractSrnModel
()
AbstractSrnModel
virtual
~CellCycleModelOdeHandler
()
CellCycleModelOdeHandler
virtual
~Identifiable
()
Identifiable
virtual
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