| AbstractCellBasedSimulation(AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > &rCellPopulation, bool deleteCellPopulationInDestructor=false, bool initialiseCells=true) | AbstractCellBasedSimulation< DIM > | |
| AddCellKiller(boost::shared_ptr< AbstractCellKiller< SPACE_DIM > > pCellKiller) | AbstractCellBasedSimulation< DIM > | |
| AddSimulationModifier(boost::shared_ptr< AbstractCellBasedSimulationModifier< ELEMENT_DIM, SPACE_DIM > > pSimulationModifier) | AbstractCellBasedSimulation< DIM > | |
| AddUpdateRule(boost::shared_ptr< AbstractUpdateRule< DIM > > pUpdateRule) | OnLatticeSimulation< DIM > | |
| boost::serialization::access class | OnLatticeSimulation< DIM > | friend |
| DoCellBirth() | AbstractCellBasedSimulation< DIM > | protectedvirtual |
| DoCellRemoval() | AbstractCellBasedSimulation< DIM > | protected |
| GetDt() | AbstractCellBasedSimulation< DIM > | |
| GetIdentifier() const | Identifiable | |
| GetNodeLocation(const unsigned &rNodeIndex) | AbstractCellBasedSimulation< DIM > | |
| GetNumBirths() | AbstractCellBasedSimulation< DIM > | |
| GetNumDeaths() | AbstractCellBasedSimulation< DIM > | |
| GetOutputCellVelocities() | AbstractCellBasedSimulation< DIM > | |
| GetOutputDirectory() | AbstractCellBasedSimulation< DIM > | |
| GetOutputDivisionLocations() | AbstractCellBasedSimulation< DIM > | |
| GetSimulationModifiers() | AbstractCellBasedSimulation< DIM > | |
| GetUpdateCellPopulationRule() | AbstractCellBasedSimulation< DIM > | |
| mCellKillers | AbstractCellBasedSimulation< DIM > | protected |
| mDeleteCellPopulationInDestructor | AbstractCellBasedSimulation< DIM > | protected |
| mDt | AbstractCellBasedSimulation< DIM > | protected |
| mEndTime | AbstractCellBasedSimulation< DIM > | protected |
| mInitialiseCells | AbstractCellBasedSimulation< DIM > | protected |
| mNoBirth | AbstractCellBasedSimulation< DIM > | protected |
| mNumBirths | AbstractCellBasedSimulation< DIM > | protected |
| mNumDeaths | AbstractCellBasedSimulation< DIM > | protected |
| mOutputCellVelocities | AbstractCellBasedSimulation< DIM > | protected |
| mOutputDirectory | AbstractCellBasedSimulation< DIM > | protected |
| mOutputDivisionLocations | AbstractCellBasedSimulation< DIM > | protected |
| mpCellVelocitiesFile | AbstractCellBasedSimulation< DIM > | protected |
| mpDivisionLocationFile | AbstractCellBasedSimulation< DIM > | protected |
| mpVizSetupFile | AbstractCellBasedSimulation< DIM > | protected |
| mrCellPopulation | AbstractCellBasedSimulation< DIM > | protected |
| mSamplingTimestepMultiple | AbstractCellBasedSimulation< DIM > | protected |
| mSimulationModifiers | AbstractCellBasedSimulation< DIM > | protected |
| mSimulationOutputDirectory | AbstractCellBasedSimulation< DIM > | protected |
| mUpdateCellPopulation | AbstractCellBasedSimulation< DIM > | protected |
| OnLatticeSimulation(AbstractCellPopulation< DIM > &rCellPopulation, bool deleteCellPopulationInDestructor=false, bool initialiseCells=true) | OnLatticeSimulation< DIM > | |
| OutputAdditionalSimulationSetup(out_stream &rParamsFile) | OnLatticeSimulation< DIM > | virtual |
| OutputSimulationParameters(out_stream &rParamsFile) | OnLatticeSimulation< DIM > | virtual |
| OutputSimulationSetup() | AbstractCellBasedSimulation< DIM > | protected |
| RemoveAllCellKillers() | AbstractCellBasedSimulation< DIM > | |
| RemoveAllUpdateRules() | OnLatticeSimulation< DIM > | |
| rGetCellPopulation() | AbstractCellBasedSimulation< DIM > | |
| rGetCellPopulation() const | AbstractCellBasedSimulation< DIM > | |
| serialize(Archive &archive, const unsigned int version) | OnLatticeSimulation< DIM > | inlineprivate |
| SetDt(double dt) | AbstractCellBasedSimulation< DIM > | |
| SetEndTime(double endTime) | AbstractCellBasedSimulation< DIM > | |
| SetNoBirth(bool noBirth) | AbstractCellBasedSimulation< DIM > | |
| SetOutputCellVelocities(bool outputCellVelocities) | AbstractCellBasedSimulation< DIM > | |
| SetOutputDirectory(std::string outputDirectory) | AbstractCellBasedSimulation< DIM > | |
| SetOutputDivisionLocations(bool outputDivisionLocations) | AbstractCellBasedSimulation< DIM > | |
| SetSamplingTimestepMultiple(unsigned samplingTimestepMultiple) | AbstractCellBasedSimulation< DIM > | |
| SetUpdateCellPopulationRule(bool updateCellPopulation) | AbstractCellBasedSimulation< DIM > | |
| SetupSolve() | AbstractCellBasedSimulation< DIM > | inlineprotectedvirtual |
| Solve() | AbstractCellBasedSimulation< DIM > | |
| StoppingEventHasOccurred() | AbstractCellBasedSimulation< DIM > | protectedvirtual |
| UpdateCellLocationsAndTopology() | OnLatticeSimulation< DIM > | protectedvirtual |
| UpdateCellPopulation() | OnLatticeSimulation< DIM > | protectedvirtual |
| WriteVisualizerSetupFile() | AbstractCellBasedSimulation< DIM > | inlineprotectedvirtual |
| ~AbstractCellBasedSimulation() | AbstractCellBasedSimulation< DIM > | virtual |
| ~Identifiable() | Identifiable | virtual |
1.8.6