AbstractCellBasedWriter.cpp

00001 /*
00002 
00003 Copyright (c) 2005-2014, University of Oxford.
00004 All rights reserved.
00005 
00006 University of Oxford means the Chancellor, Masters and Scholars of the
00007 University of Oxford, having an administrative office at Wellington
00008 Square, Oxford OX1 2JD, UK.
00009 
00010 This file is part of Chaste.
00011 
00012 Redistribution and use in source and binary forms, with or without
00013 modification, are permitted provided that the following conditions are met:
00014  * Redistributions of source code must retain the above copyright notice,
00015    this list of conditions and the following disclaimer.
00016  * Redistributions in binary form must reproduce the above copyright notice,
00017    this list of conditions and the following disclaimer in the documentation
00018    and/or other materials provided with the distribution.
00019  * Neither the name of the University of Oxford nor the names of its
00020    contributors may be used to endorse or promote products derived from this
00021    software without specific prior written permission.
00022 
00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE
00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT
00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
00033 
00034 */
00035 #include "AbstractCellBasedWriter.hpp"
00036 #include "SimulationTime.hpp"
00037 
00038 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00039 AbstractCellBasedWriter<ELEMENT_DIM, SPACE_DIM>::AbstractCellBasedWriter(const std::string &rFileName)
00040     : mFileName(rFileName)
00041 {
00042 }
00043 
00044 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00045 AbstractCellBasedWriter<ELEMENT_DIM, SPACE_DIM>::~AbstractCellBasedWriter()
00046 {
00047 }
00048 
00049 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00050 void AbstractCellBasedWriter<ELEMENT_DIM, SPACE_DIM>::CloseFile()
00051 {
00052     mpOutStream->close();
00053 }
00054 
00055 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00056 void AbstractCellBasedWriter<ELEMENT_DIM, SPACE_DIM>::OpenOutputFile(const std::string directory)
00057 {
00058     OutputFileHandler output_file_handler(directory, false);
00059     mpOutStream = output_file_handler.OpenOutputFile(mFileName);
00060 }
00061 
00062 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00063 void AbstractCellBasedWriter<ELEMENT_DIM, SPACE_DIM>::OpenOutputFileForAppend(const std::string directory)
00064 {
00065     OutputFileHandler output_file_handler(directory, false);
00066     mpOutStream = output_file_handler.OpenOutputFile(mFileName, std::ios::app);
00067 }
00068 
00069 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00070 void AbstractCellBasedWriter<ELEMENT_DIM, SPACE_DIM>::WriteTimeStamp()
00071 {
00072     *mpOutStream << SimulationTime::Instance()->GetTime() << "\t";
00073 }
00074 
00075 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00076 void AbstractCellBasedWriter<ELEMENT_DIM, SPACE_DIM>::WriteNewline()
00077 {
00078     *mpOutStream << "\n";
00079 }
00080 
00081 // Explicit instantiation
00082 template class AbstractCellBasedWriter<1,1>;
00083 template class AbstractCellBasedWriter<1,2>;
00084 template class AbstractCellBasedWriter<2,2>;
00085 template class AbstractCellBasedWriter<1,3>;
00086 template class AbstractCellBasedWriter<2,3>;
00087 template class AbstractCellBasedWriter<3,3>;

Generated by  doxygen 1.6.2