DeltaNotchOdeSystem.hpp

/*

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*/

#ifndef DELTANOTCHODESYSTEM_HPP_
#define DELTANOTCHODESYSTEM_HPP_

#include "ChasteSerialization.hpp"
#include <boost/serialization/base_object.hpp>
#include <boost/serialization/shared_ptr.hpp>

#include <cmath>
#include <iostream>

#include "AbstractOdeSystem.hpp"

class DeltaNotchOdeSystem : public AbstractOdeSystem
{
private:

    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<AbstractOdeSystem>(*this);
    }


public:

    DeltaNotchOdeSystem(std::vector<double> stateVariables=std::vector<double>());

    ~DeltaNotchOdeSystem();

    void EvaluateYDerivatives(double time, const std::vector<double>& rY, std::vector<double>& rDY);
};

// Declare identifier for the serializer
#include "SerializationExportWrapper.hpp"
CHASTE_CLASS_EXPORT(DeltaNotchOdeSystem)

namespace boost
{
namespace serialization
{
template<class Archive>
inline void save_construct_data(
    Archive & ar, const DeltaNotchOdeSystem * t, const BOOST_PFTO unsigned int file_version)
{
    const std::vector<double> state_variables = t->rGetConstStateVariables();
    ar & state_variables;
}

template<class Archive>
inline void load_construct_data(
    Archive & ar, DeltaNotchOdeSystem * t, const unsigned int file_version)
{
    std::vector<double> state_variables;
    ar & state_variables;

    // Invoke inplace constructor to initialise instance
    ::new(t)DeltaNotchOdeSystem(state_variables);
}
}
} // namespace ...

#endif /*DELTANOTCHODESYSTEM_HPP_*/