00001 /* 00002 00003 Copyright (c) 2005-2015, University of Oxford. 00004 All rights reserved. 00005 00006 University of Oxford means the Chancellor, Masters and Scholars of the 00007 University of Oxford, having an administrative office at Wellington 00008 Square, Oxford OX1 2JD, UK. 00009 00010 This file is part of Chaste. 00011 00012 Redistribution and use in source and binary forms, with or without 00013 modification, are permitted provided that the following conditions are met: 00014 * Redistributions of source code must retain the above copyright notice, 00015 this list of conditions and the following disclaimer. 00016 * Redistributions in binary form must reproduce the above copyright notice, 00017 this list of conditions and the following disclaimer in the documentation 00018 and/or other materials provided with the distribution. 00019 * Neither the name of the University of Oxford nor the names of its 00020 contributors may be used to endorse or promote products derived from this 00021 software without specific prior written permission. 00022 00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00033 00034 */ 00035 #ifndef DIFFERENTIALADHESIONUPDATERULE_HPP_ 00036 #define DIFFERENTIALADHESIONUPDATERULE_HPP_ 00037 00038 #include "ChasteSerialization.hpp" 00039 #include <boost/serialization/base_object.hpp> 00040 00041 #include "AdhesionPottsUpdateRule.hpp" 00042 #include "PottsBasedCellPopulation.hpp" 00043 00049 template<unsigned DIM> 00050 class DifferentialAdhesionPottsUpdateRule : public AdhesionPottsUpdateRule<DIM> 00051 { 00052 friend class TestPottsUpdateRules; 00053 00054 private: 00055 00061 double mLabelledCellLabelledCellAdhesionEnergyParameter; 00062 00068 double mLabelledCellCellAdhesionEnergyParameter; 00069 00075 double mLabelledCellBoundaryAdhesionEnergyParameter; 00076 00077 friend class boost::serialization::access; 00085 template<class Archive> 00086 void serialize(Archive & archive, const unsigned int version) 00087 { 00088 archive & boost::serialization::base_object<AdhesionPottsUpdateRule<DIM> >(*this); 00089 archive & mLabelledCellLabelledCellAdhesionEnergyParameter; 00090 archive & mLabelledCellCellAdhesionEnergyParameter; 00091 archive & mLabelledCellBoundaryAdhesionEnergyParameter; 00092 } 00093 00094 public: 00095 00099 DifferentialAdhesionPottsUpdateRule(); 00100 00104 virtual ~DifferentialAdhesionPottsUpdateRule(); 00105 00114 virtual double GetCellCellAdhesionEnergy(CellPtr pCellA, CellPtr pCellB); 00115 00123 virtual double GetCellBoundaryAdhesionEnergy(CellPtr pCell); 00124 00128 double GetLabelledCellLabelledCellAdhesionEnergyParameter(); 00129 00133 double GetLabelledCellCellAdhesionEnergyParameter(); 00134 00138 double GetLabelledCellBoundaryAdhesionEnergyParameter(); 00139 00145 void SetLabelledCellLabelledCellAdhesionEnergyParameter(double labelledCellLabelledCellAdhesionEnergyParameter); 00146 00152 void SetLabelledCellCellAdhesionEnergyParameter(double labelledCellCellAdhesionEnergyParameter); 00153 00159 void SetLabelledCellBoundaryAdhesionEnergyParameter(double labelledCellBoundaryAdhesionEnergyParameter); 00160 00166 void OutputUpdateRuleParameters(out_stream& rParamsFile); 00167 }; 00168 00169 #include "SerializationExportWrapper.hpp" 00170 EXPORT_TEMPLATE_CLASS_SAME_DIMS(DifferentialAdhesionPottsUpdateRule) 00171 00172 #endif /*DIFFERENTIALADHESIONUPDATERULE_HPP_*/