FarhadifarForce.hpp

00001 /*
00002 
00003 Copyright (c) 2005-2015, University of Oxford.
00004 All rights reserved.
00005 
00006 University of Oxford means the Chancellor, Masters and Scholars of the
00007 University of Oxford, having an administrative office at Wellington
00008 Square, Oxford OX1 2JD, UK.
00009 
00010 This file is part of Chaste.
00011 
00012 Redistribution and use in source and binary forms, with or without
00013 modification, are permitted provided that the following conditions are met:
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00015    this list of conditions and the following disclaimer.
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00022 
00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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00034 */
00035 
00036 #ifndef FARHADIFARFORCE_HPP_
00037 #define FARHADIFARFORCE_HPP_
00038 
00039 #include "ChasteSerialization.hpp"
00040 #include <boost/serialization/base_object.hpp>
00041 #include "Exception.hpp"
00042 
00043 #include "AbstractForce.hpp"
00044 #include "VertexBasedCellPopulation.hpp"
00045 
00046 #include <iostream>
00047 
00054 template<unsigned DIM>
00055 class FarhadifarForce  : public AbstractForce<DIM>
00056 {
00057 friend class TestForces;
00058 
00059 private:
00060 
00061     friend class boost::serialization::access;
00069     template<class Archive>
00070     void serialize(Archive & archive, const unsigned int version)
00071     {
00072         archive & boost::serialization::base_object<AbstractForce<DIM> >(*this);
00073         archive & mAreaElasticityParameter;
00074         archive & mPerimeterContractilityParameter;
00075         archive & mLineTensionParameter;
00076         archive & mBoundaryLineTensionParameter;
00077     }
00078 
00079 protected:
00080 
00084     double mAreaElasticityParameter;
00085 
00089     double mPerimeterContractilityParameter;
00090 
00094     double mLineTensionParameter;
00095 
00099     double mBoundaryLineTensionParameter;
00100 
00101 
00102 public:
00103 
00107     FarhadifarForce();
00108 
00112     virtual ~FarhadifarForce();
00113 
00122     virtual void AddForceContribution(AbstractCellPopulation<DIM>& rCellPopulation);
00123 
00133     virtual double GetLineTensionParameter(Node<DIM>* pNodeA, Node<DIM>* pNodeB, VertexBasedCellPopulation<DIM>& rVertexCellPopulation);
00134 
00138     double GetAreaElasticityParameter();
00139 
00143     double GetPerimeterContractilityParameter();
00144 
00148     double GetLineTensionParameter();
00149 
00153     double GetBoundaryLineTensionParameter();
00154 
00160     void SetAreaElasticityParameter(double areaElasticityParameter);
00161 
00167     void SetPerimeterContractilityParameter(double perimeterContractilityParameter);
00168 
00174     void SetLineTensionParameter(double lineTensionParameter);
00175 
00181     void SetBoundaryLineTensionParameter(double boundaryLineTensionParameter);
00182 
00188     void OutputForceParameters(out_stream& rParamsFile);
00189 };
00190 
00191 #include "SerializationExportWrapper.hpp"
00192 EXPORT_TEMPLATE_CLASS_SAME_DIMS(FarhadifarForce)
00193 
00194 #endif /*FARHADIFARFORCE_HPP_*/

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