00001 /* 00002 00003 Copyright (c) 2005-2015, University of Oxford. 00004 All rights reserved. 00005 00006 University of Oxford means the Chancellor, Masters and Scholars of the 00007 University of Oxford, having an administrative office at Wellington 00008 Square, Oxford OX1 2JD, UK. 00009 00010 This file is part of Chaste. 00011 00012 Redistribution and use in source and binary forms, with or without 00013 modification, are permitted provided that the following conditions are met: 00014 * Redistributions of source code must retain the above copyright notice, 00015 this list of conditions and the following disclaimer. 00016 * Redistributions in binary form must reproduce the above copyright notice, 00017 this list of conditions and the following disclaimer in the documentation 00018 and/or other materials provided with the distribution. 00019 * Neither the name of the University of Oxford nor the names of its 00020 contributors may be used to endorse or promote products derived from this 00021 software without specific prior written permission. 00022 00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00033 00034 */ 00035 00036 #include <cassert> 00037 00038 #include "NodeAttributes.hpp" 00039 #include "Exception.hpp" 00040 00041 template<unsigned SPACE_DIM> 00042 NodeAttributes<SPACE_DIM>::NodeAttributes() 00043 : mAttributes(std::vector<double>()), 00044 mRegion(0u), 00045 mAppliedForce(zero_vector<double>(SPACE_DIM)), 00046 mRadius(0.0), 00047 mIsParticle(false) 00048 { 00049 00050 } 00051 00052 template<unsigned SPACE_DIM> 00053 std::vector<double>& NodeAttributes<SPACE_DIM>::rGetAttributes() 00054 { 00055 return mAttributes; 00056 } 00057 00058 template<unsigned SPACE_DIM> 00059 void NodeAttributes<SPACE_DIM>::AddAttribute(double attribute) 00060 { 00061 mAttributes.push_back(attribute); 00062 } 00063 00064 template<unsigned SPACE_DIM> 00065 unsigned NodeAttributes<SPACE_DIM>::GetRegion() 00066 { 00067 return mRegion; 00068 } 00069 00070 template<unsigned SPACE_DIM> 00071 void NodeAttributes<SPACE_DIM>::SetRegion(unsigned region) 00072 { 00073 mRegion = region; 00074 } 00075 00076 template<unsigned SPACE_DIM> 00077 c_vector<double, SPACE_DIM>& NodeAttributes<SPACE_DIM>::rGetAppliedForce() 00078 { 00079 return mAppliedForce; 00080 } 00081 00082 template<unsigned SPACE_DIM> 00083 void NodeAttributes<SPACE_DIM>::AddAppliedForceContribution(c_vector<double, SPACE_DIM>& appliedForceContribution) 00084 { 00085 mAppliedForce += appliedForceContribution; 00086 } 00087 00088 template<unsigned SPACE_DIM> 00089 void NodeAttributes<SPACE_DIM>::ClearAppliedForce() 00090 { 00091 for (unsigned d = 0; d < SPACE_DIM; d++) 00092 { 00093 mAppliedForce[d] = 0.0; 00094 } 00095 } 00096 00097 template<unsigned SPACE_DIM> 00098 bool NodeAttributes<SPACE_DIM>::IsParticle() 00099 { 00100 return mIsParticle; 00101 } 00102 00103 template<unsigned SPACE_DIM> 00104 void NodeAttributes<SPACE_DIM>::SetIsParticle(bool isParticle) 00105 { 00106 mIsParticle = isParticle; 00107 } 00108 00109 template<unsigned SPACE_DIM> 00110 double NodeAttributes<SPACE_DIM>::GetRadius() 00111 { 00112 return mRadius; 00113 } 00114 00115 template<unsigned SPACE_DIM> 00116 void NodeAttributes<SPACE_DIM>::SetRadius(double radius) 00117 { 00118 if (radius < 0.0) 00119 { 00120 EXCEPTION("Trying to set node attributes mRadius to a negative value."); 00121 } 00122 00123 mRadius = radius; 00124 } 00125 00127 // Explicit instantiation 00129 00130 template class NodeAttributes<1>; 00131 template class NodeAttributes<2>; 00132 template class NodeAttributes<3>;