NodeAttributes.cpp

00001 /*
00002 
00003 Copyright (c) 2005-2015, University of Oxford.
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00005 
00006 University of Oxford means the Chancellor, Masters and Scholars of the
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00008 Square, Oxford OX1 2JD, UK.
00009 
00010 This file is part of Chaste.
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00022 
00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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00034 */
00035 
00036 #include <cassert>
00037 
00038 #include "NodeAttributes.hpp"
00039 #include "Exception.hpp"
00040 
00041 template<unsigned SPACE_DIM>
00042 NodeAttributes<SPACE_DIM>::NodeAttributes()
00043     :   mAttributes(std::vector<double>()),
00044         mRegion(0u),
00045         mAppliedForce(zero_vector<double>(SPACE_DIM)),
00046         mRadius(0.0),
00047         mIsParticle(false)
00048 {
00049 
00050 }
00051 
00052 template<unsigned SPACE_DIM>
00053 std::vector<double>& NodeAttributes<SPACE_DIM>::rGetAttributes()
00054 {
00055     return mAttributes;
00056 }
00057 
00058 template<unsigned SPACE_DIM>
00059 void NodeAttributes<SPACE_DIM>::AddAttribute(double attribute)
00060 {
00061     mAttributes.push_back(attribute);
00062 }
00063 
00064 template<unsigned SPACE_DIM>
00065 unsigned NodeAttributes<SPACE_DIM>::GetRegion()
00066 {
00067     return mRegion;
00068 }
00069 
00070 template<unsigned SPACE_DIM>
00071 void NodeAttributes<SPACE_DIM>::SetRegion(unsigned region)
00072 {
00073     mRegion = region;
00074 }
00075 
00076 template<unsigned SPACE_DIM>
00077 c_vector<double, SPACE_DIM>& NodeAttributes<SPACE_DIM>::rGetAppliedForce()
00078 {
00079     return mAppliedForce;
00080 }
00081 
00082 template<unsigned SPACE_DIM>
00083 void NodeAttributes<SPACE_DIM>::AddAppliedForceContribution(c_vector<double, SPACE_DIM>& appliedForceContribution)
00084 {
00085     mAppliedForce += appliedForceContribution;
00086 }
00087 
00088 template<unsigned SPACE_DIM>
00089 void NodeAttributes<SPACE_DIM>::ClearAppliedForce()
00090 {
00091     for (unsigned d = 0; d < SPACE_DIM; d++)
00092     {
00093         mAppliedForce[d] = 0.0;
00094     }
00095 }
00096 
00097 template<unsigned SPACE_DIM>
00098 bool NodeAttributes<SPACE_DIM>::IsParticle()
00099 {
00100     return mIsParticle;
00101 }
00102 
00103 template<unsigned SPACE_DIM>
00104 void NodeAttributes<SPACE_DIM>::SetIsParticle(bool isParticle)
00105 {
00106     mIsParticle = isParticle;
00107 }
00108 
00109 template<unsigned SPACE_DIM>
00110 double NodeAttributes<SPACE_DIM>::GetRadius()
00111 {
00112     return mRadius;
00113 }
00114 
00115 template<unsigned SPACE_DIM>
00116 void NodeAttributes<SPACE_DIM>::SetRadius(double radius)
00117 {
00118     if (radius < 0.0)
00119     {
00120         EXCEPTION("Trying to set node attributes mRadius to a negative value.");
00121     }
00122 
00123     mRadius = radius;
00124 }
00125 
00127 // Explicit instantiation
00129 
00130 template class NodeAttributes<1>;
00131 template class NodeAttributes<2>;
00132 template class NodeAttributes<3>;

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