NonCachedTetrahedralMesh.cpp

00001 /*
00002 
00003 Copyright (c) 2005-2015, University of Oxford.
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00006 University of Oxford means the Chancellor, Masters and Scholars of the
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00009 
00010 This file is part of Chaste.
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00012 Redistribution and use in source and binary forms, with or without
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00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
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00034 */
00035 
00036 #include "NonCachedTetrahedralMesh.hpp"
00037 #include "Exception.hpp"
00038 
00039 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00040 void NonCachedTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>::RefreshJacobianCachedData()
00041 {
00042     // Don't do any caching
00043 }
00044 
00045 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00046 void NonCachedTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>::GetJacobianForElement(unsigned elementIndex, c_matrix<double, SPACE_DIM, SPACE_DIM>& rJacobian, double& rJacobianDeterminant) const
00047 {
00048     EXCEPTION("Use GetInverseJacobianForElement to retrieve Jacobian data instead.");
00049 }
00050 
00051 
00052 template <unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00053 void NonCachedTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>::GetInverseJacobianForElement(
00054         unsigned elementIndex,
00055         c_matrix<double, SPACE_DIM, ELEMENT_DIM>& rJacobian,
00056         double& rJacobianDeterminant,
00057         c_matrix<double, ELEMENT_DIM, SPACE_DIM>& rInverseJacobian) const
00058 {
00059     this->mElements[this->SolveElementMapping(elementIndex)]->CalculateInverseJacobian(rJacobian, rJacobianDeterminant, rInverseJacobian);
00060 }
00061 
00062 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00063 void NonCachedTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>::GetWeightedDirectionForElement(unsigned elementIndex, c_vector<double, SPACE_DIM>& rWeightedDirection, double& rJacobianDeterminant) const
00064 {
00065     // See comment in AbstractTetrahedralMesh::GetWeightedDirectionForBoundaryElement()
00066     EXCEPTION("Probably redundant method.");
00067 }
00068 
00069 template <unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00070 void NonCachedTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>::GetWeightedDirectionForBoundaryElement(
00071         unsigned elementIndex,
00072         c_vector<double, SPACE_DIM>& rWeightedDirection,
00073         double& rJacobianDeterminant) const
00074 {
00075     this->mBoundaryElements[this->SolveBoundaryElementMapping(elementIndex)]->CalculateWeightedDirection(rWeightedDirection, rJacobianDeterminant );
00076 }
00077 
00078 
00080 // Explicit instantiation
00082 
00083 template class NonCachedTetrahedralMesh<3,3>;
00084 template class NonCachedTetrahedralMesh<2,2>;
00085 template class NonCachedTetrahedralMesh<1,1>;
00086 
00087 
00088 // Serialization for Boost >= 1.36
00089 #include "SerializationExportWrapperForCpp.hpp"
00090 EXPORT_TEMPLATE_CLASS2(NonCachedTetrahedralMesh, 1, 1)
00091 EXPORT_TEMPLATE_CLASS2(NonCachedTetrahedralMesh, 2, 2)
00092 EXPORT_TEMPLATE_CLASS2(NonCachedTetrahedralMesh, 3, 3)