T2SwapCellKiller.hpp

00001 /*
00002 
00003 Copyright (c) 2005-2015, University of Oxford.
00004 All rights reserved.
00005 
00006 University of Oxford means the Chancellor, Masters and Scholars of the
00007 University of Oxford, having an administrative office at Wellington
00008 Square, Oxford OX1 2JD, UK.
00009 
00010 This file is part of Chaste.
00011 
00012 Redistribution and use in source and binary forms, with or without
00013 modification, are permitted provided that the following conditions are met:
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00015    this list of conditions and the following disclaimer.
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00022 
00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
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00034 */
00035 
00036 #ifndef T2SWAPCELLKILLER_HPP_
00037 #define T2SWAPCELLKILLER_HPP_
00038 
00039 #include "AbstractCellKiller.hpp"
00040 
00041 #include "ChasteSerialization.hpp"
00042 #include <boost/serialization/base_object.hpp>
00043 
00044 #include "VertexBasedCellPopulation.hpp"
00045 
00053 template<unsigned DIM>
00054 class T2SwapCellKiller : public AbstractCellKiller<DIM>
00055 {
00056     // The test will want to clean up the private member variable mpCellPopulation
00057     friend class TestT2SwapCellKiller;
00058 
00059 private:
00060 
00062     friend class boost::serialization::access;
00069     template<class Archive>
00070     void serialize(Archive & archive, const unsigned int version)
00071     {
00072         archive & boost::serialization::base_object<AbstractCellKiller<DIM> >(*this);
00073     }
00074 
00075 public:
00076 
00082     T2SwapCellKiller(AbstractCellPopulation<DIM>* pCellPopulation);
00083 
00089     void CheckAndLabelCellsForApoptosisOrDeath();
00090 
00096     void OutputCellKillerParameters(out_stream& rParamsFile);
00097 };
00098 
00099 #include "SerializationExportWrapper.hpp"
00100 EXPORT_TEMPLATE_CLASS_SAME_DIMS(T2SwapCellKiller)
00101 
00102 namespace boost
00103 {
00104 namespace serialization
00105 {
00109 template<class Archive, unsigned DIM>
00110 inline void save_construct_data(
00111     Archive & ar, const T2SwapCellKiller<DIM> * t, const BOOST_PFTO unsigned int file_version)
00112 {
00113     // Save data required to construct instance
00114     const AbstractCellPopulation<DIM>* const p_cell_population = t->GetCellPopulation();
00115     ar << p_cell_population;
00116 }
00117 
00121 template<class Archive, unsigned DIM>
00122 inline void load_construct_data(
00123     Archive & ar, T2SwapCellKiller<DIM> * t, const unsigned int file_version)
00124 {
00125     // Retrieve data from archive required to construct new instance
00126     AbstractCellPopulation<DIM>* p_cell_population;
00127     ar >> p_cell_population;
00128 
00129     // Invoke inplace constructor to initialise instance
00130     ::new(t)T2SwapCellKiller<DIM>(p_cell_population);
00131 }
00132 } // namespace serialization
00133 } // namespace boost
00134 
00135 #endif /*T2SWAPCELLKILLER_HPP_*/

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