VertexT2SwapLocationsWriter.cpp

/*

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*/

#include "VertexT2SwapLocationsWriter.hpp"
#include "AbstractCellPopulation.hpp"
#include "MeshBasedCellPopulation.hpp"
#include "CaBasedCellPopulation.hpp"
#include "NodeBasedCellPopulation.hpp"
#include "PottsBasedCellPopulation.hpp"
#include "VertexBasedCellPopulation.hpp"
#include "UblasIncludes.hpp"

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
VertexT2SwapLocationsWriter<ELEMENT_DIM, SPACE_DIM>::VertexT2SwapLocationsWriter()
    : AbstractCellPopulationWriter<ELEMENT_DIM, SPACE_DIM>("T2SwapLocations.dat")
{
}

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
void VertexT2SwapLocationsWriter<ELEMENT_DIM, SPACE_DIM>::Visit(MeshBasedCellPopulation<ELEMENT_DIM, SPACE_DIM>* pCellPopulation)
{
}

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
void VertexT2SwapLocationsWriter<ELEMENT_DIM, SPACE_DIM>::Visit(CaBasedCellPopulation<SPACE_DIM>* pCellPopulation)
{
}

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
void VertexT2SwapLocationsWriter<ELEMENT_DIM, SPACE_DIM>::Visit(NodeBasedCellPopulation<SPACE_DIM>* pCellPopulation)
{
}

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
void VertexT2SwapLocationsWriter<ELEMENT_DIM, SPACE_DIM>::Visit(PottsBasedCellPopulation<SPACE_DIM>* pCellPopulation)
{
}

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
void VertexT2SwapLocationsWriter<ELEMENT_DIM, SPACE_DIM>::Visit(VertexBasedCellPopulation<SPACE_DIM>* pCellPopulation)
{
    std::vector< c_vector<double, SPACE_DIM> > t2_swap_locations = pCellPopulation->GetLocationsOfT2Swaps();
    std::vector< unsigned > t2_swap_ids = pCellPopulation->GetCellIdsOfT2Swaps();

    *this->mpOutStream << t2_swap_locations.size() << "\t";
    assert( t2_swap_locations.size() == t2_swap_ids.size());

    for (unsigned index = 0;  index < t2_swap_locations.size(); index++)
    {
        *this->mpOutStream << t2_swap_ids[index] << "\t";
        for (unsigned i=0; i<SPACE_DIM; i++)
        {
            *this->mpOutStream << t2_swap_locations[index][i] << "\t";
        }
    }

    pCellPopulation->ClearLocationsAndCellIdsOfT2Swaps();
}

// Explicit instantiation
template class VertexT2SwapLocationsWriter<1,1>;
template class VertexT2SwapLocationsWriter<1,2>;
template class VertexT2SwapLocationsWriter<2,2>;
template class VertexT2SwapLocationsWriter<1,3>;
template class VertexT2SwapLocationsWriter<2,3>;
template class VertexT2SwapLocationsWriter<3,3>;

#include "SerializationExportWrapperForCpp.hpp"
// Declare identifier for the serializer
EXPORT_TEMPLATE_CLASS_ALL_DIMS(VertexT2SwapLocationsWriter)