XdmfMeshWriter.hpp

00001 /*
00002 
00003 Copyright (c) 2005-2015, University of Oxford.
00004 All rights reserved.
00005 
00006 University of Oxford means the Chancellor, Masters and Scholars of the
00007 University of Oxford, having an administrative office at Wellington
00008 Square, Oxford OX1 2JD, UK.
00009 
00010 This file is part of Chaste.
00011 
00012 Redistribution and use in source and binary forms, with or without
00013 modification, are permitted provided that the following conditions are met:
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00015    this list of conditions and the following disclaimer.
00016  * Redistributions in binary form must reproduce the above copyright notice,
00017    this list of conditions and the following disclaimer in the documentation
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00022 
00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
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00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
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00034 */
00035 
00036 #ifndef XDMFMESHWRITER_HPP_
00037 #define XDMFMESHWRITER_HPP_
00038 
00039 #include "AbstractTetrahedralMeshWriter.hpp"
00040 // Xerces is currently not supported in the Windows port
00041 #ifndef _MSC_VER
00042 
00043 #include <xercesc/util/PlatformUtils.hpp>
00044 #include <xercesc/dom/DOM.hpp>
00045 #include <xercesc/framework/LocalFileFormatTarget.hpp>
00046 #include <xsd/cxx/xml/string.hxx>
00047 
00048 #ifndef X //Also used in XmlTools in the heart component
00049 
00053 #define X(str) xsd::cxx::xml::string(str).c_str()
00054 #endif //X
00055 
00056 #endif // _MSC_VER
00057 
00061 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
00062 class XdmfMeshWriter : public AbstractTetrahedralMeshWriter<ELEMENT_DIM, SPACE_DIM>
00063 {
00064 protected:
00065     unsigned mNumberOfTimePoints; 
00066     double mTimeStep; 
00068 private:
00073     void WriteXdmfMasterFile(unsigned numberOfChunks=1u);
00074 
00075 #ifndef _MSC_VER
00076 
00083     virtual void AddDataOnNodes(XERCES_CPP_NAMESPACE_QUALIFIER DOMElement* pGridElement,
00084                                 XERCES_CPP_NAMESPACE_QUALIFIER DOMDocument* pDomDocument,
00085                                 unsigned timeStep)
00086     {
00087         //Empty body - implemented in derived classes
00088     }
00089 #endif // _MSC_VER
00090 
00091 public:
00099     XdmfMeshWriter(const std::string& rDirectory,
00100                    const std::string& rBaseName,
00101                    const bool clearOutputDir=true);
00105     void WriteFiles();
00112     void WriteFilesUsingMesh(AbstractTetrahedralMesh<ELEMENT_DIM, SPACE_DIM>& rMesh,
00113                              bool keepOriginalElementIndexing=true);
00114 };
00115 
00116 #endif /* XDMFMESHWRITER_HPP_ */

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