==936536== Memcheck, a memory error detector
==936536== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==936536== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==936536== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacElectroMechanicsProblem -malloc_debug -malloc_dump -memory_info
==936536== Parent PID: 914403
==936536== 
==936536== WARNING: pwritev(vector[...]) is an obsolete suppression line not supported in valgrind 3.15 or later.
==936536== You should replace [...] by a specific index such as [0] or [1] or [2] or similar
==936536== 
==936536== Syscall param socketcall.getsockopt(optlen) points to uninitialised byte(s)
==936536==    at 0xA33F79E: getsockopt_syscall (getsockopt.c:29)
==936536==    by 0xA33F79E: getsockopt (getsockopt.c:94)
==936536==    by 0x1444F157: pmix_ptl_base_set_timeout (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x14456A1A: pmix_ptl_base_make_connection (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x1445DDF3: ??? (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x1435D3C1: PMIx_Init (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x142D6E4A: ext3x_client_init (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext3x.so)
==936536==    by 0x13A95E6D: ??? (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so)
==936536==    by 0xD0924CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==936536==    by 0x9B36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0x9ACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0xA535D38: PetscInitialize (pinit.c:924)
==936536==    by 0x99F658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==936536==    by 0x99F65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==936536==    by 0x13DCC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==936536==    by 0x13542F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==936536==    by 0x1389B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==936536==    by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==936536==    by 0x138EE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==936536==    by 0x133760: main (TestCardiacElectroMechanicsProblem.cpp:19)
==936536==  Address 0x1ffeffdfbc is on thread 1's stack
==936536==  in frame #2, created by pmix_ptl_base_make_connection (???:)
==936536== 
{
   <insert_a_suppression_name_here>
   Memcheck:Param
   socketcall.getsockopt(optlen)
   fun:getsockopt_syscall
   fun:getsockopt
   fun:pmix_ptl_base_set_timeout
   fun:pmix_ptl_base_make_connection
   obj:/usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2
   fun:PMIx_Init
   fun:ext3x_client_init
   obj:/usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so
   fun:orte_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==936536== Syscall param socketcall.getsockopt(optlen_out) points to uninitialised byte(s)
==936536==    at 0xA33F79E: getsockopt_syscall (getsockopt.c:29)
==936536==    by 0xA33F79E: getsockopt (getsockopt.c:94)
==936536==    by 0x1444F157: pmix_ptl_base_set_timeout (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x14456A1A: pmix_ptl_base_make_connection (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x1445DDF3: ??? (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x1435D3C1: PMIx_Init (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x142D6E4A: ext3x_client_init (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext3x.so)
==936536==    by 0x13A95E6D: ??? (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so)
==936536==    by 0xD0924CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==936536==    by 0x9B36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0x9ACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0xA535D38: PetscInitialize (pinit.c:924)
==936536==    by 0x99F658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==936536==    by 0x99F65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==936536==    by 0x13DCC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==936536==    by 0x13542F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==936536==    by 0x1389B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==936536==    by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==936536==    by 0x138EE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==936536==    by 0x133760: main (TestCardiacElectroMechanicsProblem.cpp:19)
==936536==  Address 0x1ffeffdfbc is on thread 1's stack
==936536==  in frame #2, created by pmix_ptl_base_make_connection (???:)
==936536== 
{
   <insert_a_suppression_name_here>
   Memcheck:Param
   socketcall.getsockopt(optlen_out)
   fun:getsockopt_syscall
   fun:getsockopt
   fun:pmix_ptl_base_set_timeout
   fun:pmix_ptl_base_make_connection
   obj:/usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2
   fun:PMIx_Init
   fun:ext3x_client_init
   obj:/usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so
   fun:orte_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==936536== Syscall param setsockopt(optlen) contains uninitialised byte(s)
==936536==    at 0xA33FC7E: setsockopt_syscall (setsockopt.c:29)
==936536==    by 0xA33FC7E: setsockopt (setsockopt.c:95)
==936536==    by 0x14456BA9: pmix_ptl_base_make_connection (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x1445DDF3: ??? (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x1435D3C1: PMIx_Init (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==936536==    by 0x142D6E4A: ext3x_client_init (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext3x.so)
==936536==    by 0x13A95E6D: ??? (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so)
==936536==    by 0xD0924CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==936536==    by 0x9B36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0x9ACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0xA535D38: PetscInitialize (pinit.c:924)
==936536==    by 0x99F658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==936536==    by 0x99F65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==936536==    by 0x13DCC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==936536==    by 0x13542F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==936536==    by 0x1389B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==936536==    by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==936536==    by 0x138EE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==936536==    by 0x133760: main (TestCardiacElectroMechanicsProblem.cpp:19)
==936536== 
{
   <insert_a_suppression_name_here>
   Memcheck:Param
   setsockopt(optlen)
   fun:setsockopt_syscall
   fun:setsockopt
   fun:pmix_ptl_base_make_connection
   obj:/usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2
   fun:PMIx_Init
   fun:ext3x_client_init
   obj:/usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so
   fun:orte_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==936536== Syscall param pwrite64(buf) points to uninitialised byte(s)
==936536==    at 0xA32A9EF: __libc_pwrite64 (pwrite64.c:25)
==936536==    by 0xA32A9EF: pwrite (pwrite64.c:23)
==936536==    by 0x17CCC9D2: mca_fbtl_posix_pwritev (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_fbtl_posix.so)
==936536==    by 0x17CDC419: mca_common_ompio_file_write (in /usr/lib/x86_64-linux-gnu/libmca_common_ompio.so.41.29.2)
==936536==    by 0x17CDC79A: mca_common_ompio_file_write_at (in /usr/lib/x86_64-linux-gnu/libmca_common_ompio.so.41.29.2)
==936536==    by 0x17BC789A: mca_io_ompio_file_write_at (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_io_ompio.so)
==936536==    by 0x9AC36A7: PMPI_File_write_at (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0xCEF1FEB: ??? (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD314ED: H5FD_write (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD14313: H5F__accum_write (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCE0F442: H5PB_write (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1BDEA: H5F_block_write (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCCA5E98: H5C__flush_single_entry (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCEE53F9: H5C_apply_candidate_list (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCEE69CA: H5AC__run_sync_point (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCEE747E: H5AC__flush_entries (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCC8254C: H5AC_flush (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1A936: ??? (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1B3FE: H5F__dest (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1EBB2: H5F_try_close (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1EEFB: H5F__close_cb (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD8E51F: H5I_dec_ref (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD8E5EA: H5I_dec_app_ref (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1B831: H5F__close (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD10881: H5Fclose (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0x9925967: Hdf5DataWriter::Close() (Hdf5DataWriter.cpp:1100)
==936536==    by 0x68B0345: CardiacElectroMechanicsProblem<2u, 1u>::Solve() (CardiacElectroMechanicsProblem.cpp:889)
==936536==    by 0x13EE1B: TestCardiacElectroMechanicsProblem::TestWithHomogeneousEverythingCompressible() (TestCardiacElectroMechanicsProblem.hpp:185)
==936536==    by 0x147F86: TestDescription_TestCardiacElectroMechanicsProblem_TestWithHomogeneousEverythingCompressible::runTest() (TestCardiacElectroMechanicsProblem.cpp:37)
==936536==    by 0x134A2A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==936536==    by 0x138C60: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==936536==    by 0x138B45: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==936536==    by 0x1389EB: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==936536==    by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==936536==    by 0x138EE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==936536==    by 0x133760: main (TestCardiacElectroMechanicsProblem.cpp:19)
==936536==  Address 0x1623938e is 62 bytes inside a block of size 320 alloc'd
==936536==    at 0x4848899: malloc (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==936536==    by 0xCCA5E26: H5C__flush_single_entry (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCEE53F9: H5C_apply_candidate_list (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCEE69CA: H5AC__run_sync_point (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCEE747E: H5AC__flush_entries (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCC8254C: H5AC_flush (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1A936: ??? (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1B3FE: H5F__dest (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1EBB2: H5F_try_close (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1EEFB: H5F__close_cb (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD8E51F: H5I_dec_ref (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD8E5EA: H5I_dec_app_ref (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD1B831: H5F__close (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0xCD10881: H5Fclose (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==936536==    by 0x9925967: Hdf5DataWriter::Close() (Hdf5DataWriter.cpp:1100)
==936536==    by 0x68B0345: CardiacElectroMechanicsProblem<2u, 1u>::Solve() (CardiacElectroMechanicsProblem.cpp:889)
==936536==    by 0x13EE1B: TestCardiacElectroMechanicsProblem::TestWithHomogeneousEverythingCompressible() (TestCardiacElectroMechanicsProblem.hpp:185)
==936536==    by 0x147F86: TestDescription_TestCardiacElectroMechanicsProblem_TestWithHomogeneousEverythingCompressible::runTest() (TestCardiacElectroMechanicsProblem.cpp:37)
==936536==    by 0x134A2A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==936536==    by 0x138C60: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==936536==    by 0x138B45: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==936536==    by 0x1389EB: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==936536==    by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==936536==    by 0x138EE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==936536==    by 0x133760: main (TestCardiacElectroMechanicsProblem.cpp:19)
==936536== 
{
   <insert_a_suppression_name_here>
   Memcheck:Param
   pwrite64(buf)
   fun:__libc_pwrite64
   fun:pwrite
   fun:mca_fbtl_posix_pwritev
   fun:mca_common_ompio_file_write
   fun:mca_common_ompio_file_write_at
   fun:mca_io_ompio_file_write_at
   fun:PMPI_File_write_at
   obj:/usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0
   fun:H5FD_write
   fun:H5F__accum_write
   fun:H5PB_write
   fun:H5F_block_write
   fun:H5C__flush_single_entry
   fun:H5C_apply_candidate_list
   fun:H5AC__run_sync_point
   fun:H5AC__flush_entries
   fun:H5AC_flush
   obj:/usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0
   fun:H5F__dest
   fun:H5F_try_close
   fun:H5F__close_cb
   fun:H5I_dec_ref
   fun:H5I_dec_app_ref
   fun:H5F__close
   fun:H5Fclose
   fun:_ZN14Hdf5DataWriter5CloseEv
   fun:_ZN30CardiacElectroMechanicsProblemILj2ELj1EE5SolveEv
   fun:_ZN34TestCardiacElectroMechanicsProblem41TestWithHomogeneousEverythingCompressibleEv
   fun:_ZN92TestDescription_TestCardiacElectroMechanicsProblem_TestWithHomogeneousEverythingCompressible7runTestEv
   fun:_ZN7CxxTest19RealTestDescription3runEv
   fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE
   fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==936536== 
==936536== FILE DESCRIPTORS: 9 open (3 std) at exit.
==936536== Open file descriptor 12:
==936536==    at 0xA32D22D: pipe (pipe.c:29)
==936536==    by 0x13A9607D: ???
==936536==    by 0xD0924CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==936536==    by 0x9B36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0x9ACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0xA535D38: PetscInitialize (pinit.c:924)
==936536==    by 0x99F658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==936536==    by 0x99F65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==936536==    by 0x13DCC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==936536==    by 0x13542F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==936536==    by 0x1389B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==936536==    by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==936536==    by 0x138EE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==936536==    by 0x133760: main (TestCardiacElectroMechanicsProblem.cpp:19)
==936536== 
==936536== Open file descriptor 8: /dev/shm/open_mpi.0000
==936536==    at 0xA331BCC: __open_nocancel (open64_nocancel.c:39)
==936536==    by 0xA2B5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40)
==936536==    by 0x9A2E822: ???
==936536==    by 0x9A2E96F: ???
==936536==    by 0xD1376DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==936536==    by 0xD137938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==936536==    by 0xD0ED922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==936536==    by 0xD0922DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==936536==    by 0x9B36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0x9ACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0xA535D38: PetscInitialize (pinit.c:924)
==936536==    by 0x99F658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==936536==    by 0x99F65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==936536==    by 0x13DCC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==936536==    by 0x13542F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==936536==    by 0x1389B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==936536==    by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==936536==    by 0x138EE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==936536==    by 0x133760: main (TestCardiacElectroMechanicsProblem.cpp:19)
==936536== 
==936536== Open file descriptor 111:
==936536==    <inherited from parent>
==936536== 
==936536== Open file descriptor 108:
==936536==    <inherited from parent>
==936536== 
==936536== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacElectroMechanicsProblem_valgrind.txt
==936536==    <inherited from parent>
==936536== 
==936536== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==936536==    <inherited from parent>
==936536== 
==936536== 
==936536== HEAP SUMMARY:
==936536==     in use at exit: 701,234 bytes in 9,387 blocks
==936536==   total heap usage: 569,492 allocs, 560,105 frees, 1,496,511,222 bytes allocated
==936536== 
==936536== 552 bytes in 1 blocks are definitely lost in loss record 43 of 69
==936536==    at 0x484DA83: calloc (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==936536==    by 0x14364C13: ???
==936536==    by 0x1436522C: ???
==936536==    by 0x142D84B7: ???
==936536==    by 0x9A9C15A: ompi_proc_complete_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0x9B36A97: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0x9ACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0xA535D38: PetscInitialize (pinit.c:924)
==936536==    by 0x99F658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==936536==    by 0x99F65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==936536==    by 0x13DCC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==936536==    by 0x13542F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==936536==    by 0x1389B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==936536==    by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==936536==    by 0x138EE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==936536==    by 0x133760: main (TestCardiacElectroMechanicsProblem.cpp:19)
==936536== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:calloc
   obj:*
   obj:*
   obj:*
   fun:ompi_proc_complete_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==936536== 624,060 (136 direct, 623,924 indirect) bytes in 1 blocks are definitely lost in loss record 69 of 69
==936536==    at 0x484DA83: calloc (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==936536==    by 0x154D774E: ???
==936536==    by 0x154D7E0B: ???
==936536==    by 0x154DAF56: ???
==936536==    by 0x154D065D: ???
==936536==    by 0x154D0FA3: ???
==936536==    by 0xD1A3F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==936536==    by 0xD17FAE8: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==936536==    by 0xD130CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==936536==    by 0xD05DEF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==936536==    by 0x13A96F03: ???
==936536==    by 0xD0924CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==936536==    by 0x9B36418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0x9ACFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==936536==    by 0xA535D38: PetscInitialize (pinit.c:924)
==936536==    by 0x99F658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==936536==    by 0x99F65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==936536==    by 0x13DCC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==936536==    by 0x13542F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==936536==    by 0x1389B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==936536==    by 0x138852: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==936536==    by 0x138EE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==936536==    by 0x133760: main (TestCardiacElectroMechanicsProblem.cpp:19)
==936536== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:calloc
   obj:*
   obj:*
   obj:*
   obj:*
   obj:*
   obj:/usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2
   fun:hwloc_topology_load
   fun:opal_hwloc_base_get_topology
   fun:orte_ess_base_proc_binding
   obj:*
   fun:orte_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==936536== LEAK SUMMARY:
==936536==    definitely lost: 688 bytes in 2 blocks
==936536==    indirectly lost: 1,760 bytes in 16 blocks
==936536==      possibly lost: 0 bytes in 0 blocks
==936536==    still reachable: 1,531 bytes in 6 blocks
==936536==         suppressed: 697,255 bytes in 9,363 blocks
==936536== Reachable blocks (those to which a pointer was found) are not shown.
==936536== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==936536== 
==936536== Use --track-origins=yes to see where uninitialised values come from
==936536== For lists of detected and suppressed errors, rerun with: -s
==936536== ERROR SUMMARY: 47 errors from 6 contexts (suppressed: 32 from 32)
