==914406== Memcheck, a memory error detector ==914406== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==914406== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==914406== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==914406== Parent PID: 914403 ==914406== ==914406== WARNING: pwritev(vector[...]) is an obsolete suppression line not supported in valgrind 3.15 or later. ==914406== You should replace [...] by a specific index such as [0] or [1] or [2] or similar ==914406== ==914406== Syscall param socketcall.getsockopt(optlen) points to uninitialised byte(s) ==914406== at 0x4CD679E: getsockopt_syscall (getsockopt.c:29) ==914406== by 0x4CD679E: getsockopt (getsockopt.c:94) ==914406== by 0xB890157: pmix_ptl_base_set_timeout (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB897A1A: pmix_ptl_base_make_connection (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB89EDF3: ??? (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB79E3C1: PMIx_Init (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB717E4A: ext3x_client_init (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext3x.so) ==914406== by 0xAED6E6D: ??? (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so) ==914406== by 0x89EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==914406== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==914406== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==914406== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==914406== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==914406== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==914406== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==914406== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==914406== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==914406== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==914406== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==914406== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==914406== by 0x119C80: main (TestCitations.cpp:18) ==914406== Address 0x1ffeffddbc is on thread 1's stack ==914406== in frame #2, created by pmix_ptl_base_make_connection (???:) ==914406== { Memcheck:Param socketcall.getsockopt(optlen) fun:getsockopt_syscall fun:getsockopt fun:pmix_ptl_base_set_timeout fun:pmix_ptl_base_make_connection obj:/usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2 fun:PMIx_Init fun:ext3x_client_init obj:/usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so fun:orte_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN13TestCitations18TestChasteCitationEv fun:_ZN48TestDescription_TestCitations_TestChasteCitation7runTestEv fun:_ZN7CxxTest19RealTestDescription3runEv fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==914406== Syscall param socketcall.getsockopt(optlen_out) points to uninitialised byte(s) ==914406== at 0x4CD679E: getsockopt_syscall (getsockopt.c:29) ==914406== by 0x4CD679E: getsockopt (getsockopt.c:94) ==914406== by 0xB890157: pmix_ptl_base_set_timeout (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB897A1A: pmix_ptl_base_make_connection (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB89EDF3: ??? (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB79E3C1: PMIx_Init (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB717E4A: ext3x_client_init (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext3x.so) ==914406== by 0xAED6E6D: ??? (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so) ==914406== by 0x89EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==914406== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==914406== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==914406== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==914406== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==914406== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==914406== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==914406== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==914406== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==914406== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==914406== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==914406== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==914406== by 0x119C80: main (TestCitations.cpp:18) ==914406== Address 0x1ffeffddbc is on thread 1's stack ==914406== in frame #2, created by pmix_ptl_base_make_connection (???:) ==914406== { Memcheck:Param socketcall.getsockopt(optlen_out) fun:getsockopt_syscall fun:getsockopt fun:pmix_ptl_base_set_timeout fun:pmix_ptl_base_make_connection obj:/usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2 fun:PMIx_Init fun:ext3x_client_init obj:/usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so fun:orte_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN13TestCitations18TestChasteCitationEv fun:_ZN48TestDescription_TestCitations_TestChasteCitation7runTestEv fun:_ZN7CxxTest19RealTestDescription3runEv fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==914406== Syscall param setsockopt(optlen) contains uninitialised byte(s) ==914406== at 0x4CD6C7E: setsockopt_syscall (setsockopt.c:29) ==914406== by 0x4CD6C7E: setsockopt (setsockopt.c:95) ==914406== by 0xB897BA9: pmix_ptl_base_make_connection (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB89EDF3: ??? (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB79E3C1: PMIx_Init (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2) ==914406== by 0xB717E4A: ext3x_client_init (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext3x.so) ==914406== by 0xAED6E6D: ??? (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so) ==914406== by 0x89EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==914406== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==914406== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==914406== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==914406== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==914406== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==914406== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==914406== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==914406== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==914406== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==914406== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==914406== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==914406== by 0x119C80: main (TestCitations.cpp:18) ==914406== { Memcheck:Param setsockopt(optlen) fun:setsockopt_syscall fun:setsockopt fun:pmix_ptl_base_make_connection obj:/usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2 fun:PMIx_Init fun:ext3x_client_init obj:/usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so fun:orte_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN13TestCitations18TestChasteCitationEv fun:_ZN48TestDescription_TestCitations_TestChasteCitation7runTestEv fun:_ZN7CxxTest19RealTestDescription3runEv fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==914406== ==914406== FILE DESCRIPTORS: 9 open (3 std) at exit. ==914406== Open file descriptor 12: ==914406== at 0x4CC422D: pipe (pipe.c:29) ==914406== by 0xAED707D: ??? ==914406== by 0x89EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==914406== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==914406== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==914406== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==914406== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==914406== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==914406== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==914406== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==914406== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==914406== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==914406== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==914406== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==914406== by 0x119C80: main (TestCitations.cpp:18) ==914406== ==914406== Open file descriptor 8: /dev/shm/open_mpi.0000 ==914406== at 0x4CC8BCC: __open_nocancel (open64_nocancel.c:39) ==914406== by 0x4C4CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==914406== by 0x4944822: ??? ==914406== by 0x494496F: ??? ==914406== by 0x8A906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==914406== by 0x8A90938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==914406== by 0x8A46922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==914406== by 0x89EB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==914406== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==914406== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==914406== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==914406== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==914406== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==914406== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==914406== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==914406== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==914406== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==914406== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==914406== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==914406== by 0x119C80: main (TestCitations.cpp:18) ==914406== ==914406== Open file descriptor 111: ==914406== ==914406== ==914406== Open file descriptor 108: ==914406== ==914406== ==914406== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==914406== ==914406== ==914406== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==914406== ==914406== ==914406== ==914406== HEAP SUMMARY: ==914406== in use at exit: 700,274 bytes in 9,377 blocks ==914406== total heap usage: 47,428 allocs, 38,051 frees, 1,353,324,470 bytes allocated ==914406== ==914406== 552 bytes in 1 blocks are definitely lost in loss record 39 of 62 ==914406== at 0x484DA83: calloc (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==914406== by 0xB7A5C13: ??? ==914406== by 0xB7A622C: ??? ==914406== by 0xB7194B7: ??? ==914406== by 0x620415A: ompi_proc_complete_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x629EA97: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==914406== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==914406== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==914406== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==914406== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==914406== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==914406== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==914406== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==914406== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==914406== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==914406== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==914406== by 0x119C80: main (TestCitations.cpp:18) ==914406== { Memcheck:Leak match-leak-kinds: definite fun:calloc obj:* obj:* obj:* fun:ompi_proc_complete_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN13TestCitations18TestChasteCitationEv fun:_ZN48TestDescription_TestCitations_TestChasteCitation7runTestEv fun:_ZN7CxxTest19RealTestDescription3runEv fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==914406== 685,304 (136 direct, 685,168 indirect) bytes in 1 blocks are definitely lost in loss record 62 of 62 ==914406== at 0x484DA83: calloc (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==914406== by 0xC9B974E: ??? ==914406== by 0xC9B9E0B: ??? ==914406== by 0xC9BCF56: ??? ==914406== by 0xC9B265D: ??? ==914406== by 0xC9B2FA3: ??? ==914406== by 0x8AFEF05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==914406== by 0x8ADAAE8: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2) ==914406== by 0x8A89CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==914406== by 0x89B6EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==914406== by 0xAED7F03: ??? ==914406== by 0x89EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==914406== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==914406== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==914406== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==914406== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==914406== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==914406== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==914406== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==914406== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==914406== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==914406== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==914406== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==914406== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==914406== by 0x119C80: main (TestCitations.cpp:18) ==914406== { Memcheck:Leak match-leak-kinds: definite fun:calloc obj:* obj:* obj:* obj:* obj:* obj:/usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2 fun:hwloc_topology_load fun:opal_hwloc_base_get_topology fun:orte_ess_base_proc_binding obj:* fun:orte_init fun:ompi_mpi_init fun:PMPI_Init_thread fun:PetscInitialize fun:_ZN15PetscSetupUtils15InitialisePetscEv fun:_ZN15PetscSetupUtils11CommonSetupEv fun:_ZN13TestCitations18TestChasteCitationEv fun:_ZN48TestDescription_TestCitations_TestChasteCitation7runTestEv fun:_ZN7CxxTest19RealTestDescription3runEv fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE fun:_ZN7CxxTest10TestRunner8runWorldEv fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE fun:_ZN7CxxTest14ErrorFormatter3runEv fun:main } ==914406== LEAK SUMMARY: ==914406== definitely lost: 688 bytes in 2 blocks ==914406== indirectly lost: 1,760 bytes in 16 blocks ==914406== possibly lost: 0 bytes in 0 blocks ==914406== still reachable: 1,531 bytes in 6 blocks ==914406== suppressed: 696,295 bytes in 9,353 blocks ==914406== Reachable blocks (those to which a pointer was found) are not shown. ==914406== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==914406== ==914406== Use --track-origins=yes to see where uninitialised values come from ==914406== For lists of detected and suppressed errors, rerun with: -s ==914406== ERROR SUMMARY: 5 errors from 5 contexts (suppressed: 29 from 29)