==3305357== Memcheck, a memory error detector
==3305357== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al.
==3305357== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info
==3305357== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestVoltageInterpolaterOntoMechanicsMesh -malloc_debug -malloc_dump -memory_info
==3305357== Parent PID: 3282641
==3305357== 
==3305357== WARNING: pwritev(vector[...]) is an obsolete suppression line not supported in valgrind 3.15 or later.
==3305357== You should replace [...] by a specific index such as [0] or [1] or [2] or similar
==3305357== 
==3305357== Syscall param socketcall.getsockopt(optlen) points to uninitialised byte(s)
==3305357==    at 0xB24679E: getsockopt_syscall (getsockopt.c:29)
==3305357==    by 0xB24679E: getsockopt (getsockopt.c:94)
==3305357==    by 0x1467E157: pmix_ptl_base_set_timeout (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x14685A1A: pmix_ptl_base_make_connection (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x1468CDF3: ??? (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x1458C3C1: PMIx_Init (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x14505E4A: ext3x_client_init (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext3x.so)
==3305357==    by 0x13CC4E6D: ??? (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so)
==3305357==    by 0xF4C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0xB5C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xB560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0x98CBD38: PetscInitialize (pinit.c:924)
==3305357==    by 0x979F66F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==3305357==    by 0x979F6BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==3305357==    by 0x128164: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==3305357==    by 0x12245D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==3305357==    by 0x124BB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357==  Address 0x1ffeffdf8c is on thread 1's stack
==3305357==  in frame #2, created by pmix_ptl_base_make_connection (???:)
==3305357== 
{
   <insert_a_suppression_name_here>
   Memcheck:Param
   socketcall.getsockopt(optlen)
   fun:getsockopt_syscall
   fun:getsockopt
   fun:pmix_ptl_base_set_timeout
   fun:pmix_ptl_base_make_connection
   obj:/usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2
   fun:PMIx_Init
   fun:ext3x_client_init
   obj:/usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so
   fun:orte_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==3305357== Syscall param socketcall.getsockopt(optlen_out) points to uninitialised byte(s)
==3305357==    at 0xB24679E: getsockopt_syscall (getsockopt.c:29)
==3305357==    by 0xB24679E: getsockopt (getsockopt.c:94)
==3305357==    by 0x1467E157: pmix_ptl_base_set_timeout (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x14685A1A: pmix_ptl_base_make_connection (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x1468CDF3: ??? (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x1458C3C1: PMIx_Init (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x14505E4A: ext3x_client_init (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext3x.so)
==3305357==    by 0x13CC4E6D: ??? (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so)
==3305357==    by 0xF4C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0xB5C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xB560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0x98CBD38: PetscInitialize (pinit.c:924)
==3305357==    by 0x979F66F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==3305357==    by 0x979F6BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==3305357==    by 0x128164: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==3305357==    by 0x12245D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==3305357==    by 0x124BB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357==  Address 0x1ffeffdf8c is on thread 1's stack
==3305357==  in frame #2, created by pmix_ptl_base_make_connection (???:)
==3305357== 
{
   <insert_a_suppression_name_here>
   Memcheck:Param
   socketcall.getsockopt(optlen_out)
   fun:getsockopt_syscall
   fun:getsockopt
   fun:pmix_ptl_base_set_timeout
   fun:pmix_ptl_base_make_connection
   obj:/usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2
   fun:PMIx_Init
   fun:ext3x_client_init
   obj:/usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so
   fun:orte_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==3305357== Syscall param setsockopt(optlen) contains uninitialised byte(s)
==3305357==    at 0xB246C7E: setsockopt_syscall (setsockopt.c:29)
==3305357==    by 0xB246C7E: setsockopt (setsockopt.c:95)
==3305357==    by 0x14685BA9: pmix_ptl_base_make_connection (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x1468CDF3: ??? (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x1458C3C1: PMIx_Init (in /usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2)
==3305357==    by 0x14505E4A: ext3x_client_init (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_pmix_ext3x.so)
==3305357==    by 0x13CC4E6D: ??? (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so)
==3305357==    by 0xF4C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0xB5C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xB560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0x98CBD38: PetscInitialize (pinit.c:924)
==3305357==    by 0x979F66F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==3305357==    by 0x979F6BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==3305357==    by 0x128164: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==3305357==    by 0x12245D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==3305357==    by 0x124BB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357== 
{
   <insert_a_suppression_name_here>
   Memcheck:Param
   setsockopt(optlen)
   fun:setsockopt_syscall
   fun:setsockopt
   fun:pmix_ptl_base_make_connection
   obj:/usr/lib/x86_64-linux-gnu/pmix2/lib/libpmix.so.2.5.2
   fun:PMIx_Init
   fun:ext3x_client_init
   obj:/usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_ess_singleton.so
   fun:orte_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==3305357== Syscall param pwrite64(buf) points to uninitialised byte(s)
==3305357==    at 0xB2319EF: __libc_pwrite64 (pwrite64.c:25)
==3305357==    by 0xB2319EF: pwrite (pwrite64.c:23)
==3305357==    by 0x176FB9D2: mca_fbtl_posix_pwritev (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_fbtl_posix.so)
==3305357==    by 0x1770B419: mca_common_ompio_file_write (in /usr/lib/x86_64-linux-gnu/libmca_common_ompio.so.41.29.2)
==3305357==    by 0x1770B79A: mca_common_ompio_file_write_at (in /usr/lib/x86_64-linux-gnu/libmca_common_ompio.so.41.29.2)
==3305357==    by 0x175F689A: mca_io_ompio_file_write_at (in /usr/lib/x86_64-linux-gnu/openmpi/lib/openmpi3/mca_io_ompio.so)
==3305357==    by 0xB5546A7: PMPI_File_write_at (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xD152FEB: ??? (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF924ED: H5FD_write (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF75313: H5F__accum_write (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xD070442: H5PB_write (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7CDEA: H5F_block_write (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF06E98: H5C__flush_single_entry (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xD1463F9: H5C_apply_candidate_list (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xD1479CA: H5AC__run_sync_point (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xD14847E: H5AC__flush_entries (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCEE354C: H5AC_flush (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7B936: ??? (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7C3FE: H5F__dest (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7FBB2: H5F_try_close (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7FEFB: H5F__close_cb (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCFEF51F: H5I_dec_ref (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCFEF5EA: H5I_dec_app_ref (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7C831: H5F__close (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF71881: H5Fclose (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0x96CD8E7: Hdf5DataWriter::Close() (Hdf5DataWriter.cpp:1100)
==3305357==    by 0x96C85C7: Hdf5DataWriter::~Hdf5DataWriter() (Hdf5DataWriter.cpp:273)
==3305357==    by 0x96C866D: Hdf5DataWriter::~Hdf5DataWriter() (Hdf5DataWriter.cpp:283)
==3305357==    by 0x6851BE5: VoltageInterpolaterOntoMechanicsMesh<1u>::VoltageInterpolaterOntoMechanicsMesh(TetrahedralMesh<1u, 1u>&, QuadraticMesh<1u>&, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >) (VoltageInterpolaterOntoMechanicsMesh.cpp:133)
==3305357==    by 0x1286E3: TestVoltageInterpolaterOntoMechanicsMesh::TestWith1dData() (TestVoltageInterpolaterOntoMechanicsMesh.hpp:87)
==3305357==    by 0x12B6D2: TestDescription_TestVoltageInterpolaterOntoMechanicsMesh_TestWith1dData::runTest() (TestVoltageInterpolaterOntoMechanicsMesh.cpp:30)
==3305357==    by 0x121C94: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==3305357==    by 0x124E62: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==3305357==    by 0x124D47: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==3305357==    by 0x124BED: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357==  Address 0x15ce3bee is 62 bytes inside a block of size 320 alloc'd
==3305357==    at 0x4848899: malloc (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==3305357==    by 0xCF06E26: H5C__flush_single_entry (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xD1463F9: H5C_apply_candidate_list (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xD1479CA: H5AC__run_sync_point (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xD14847E: H5AC__flush_entries (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCEE354C: H5AC_flush (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7B936: ??? (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7C3FE: H5F__dest (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7FBB2: H5F_try_close (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7FEFB: H5F__close_cb (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCFEF51F: H5I_dec_ref (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCFEF5EA: H5I_dec_app_ref (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF7C831: H5F__close (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0xCF71881: H5Fclose (in /usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0)
==3305357==    by 0x96CD8E7: Hdf5DataWriter::Close() (Hdf5DataWriter.cpp:1100)
==3305357==    by 0x96C85C7: Hdf5DataWriter::~Hdf5DataWriter() (Hdf5DataWriter.cpp:273)
==3305357==    by 0x96C866D: Hdf5DataWriter::~Hdf5DataWriter() (Hdf5DataWriter.cpp:283)
==3305357==    by 0x6851BE5: VoltageInterpolaterOntoMechanicsMesh<1u>::VoltageInterpolaterOntoMechanicsMesh(TetrahedralMesh<1u, 1u>&, QuadraticMesh<1u>&, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >) (VoltageInterpolaterOntoMechanicsMesh.cpp:133)
==3305357==    by 0x1286E3: TestVoltageInterpolaterOntoMechanicsMesh::TestWith1dData() (TestVoltageInterpolaterOntoMechanicsMesh.hpp:87)
==3305357==    by 0x12B6D2: TestDescription_TestVoltageInterpolaterOntoMechanicsMesh_TestWith1dData::runTest() (TestVoltageInterpolaterOntoMechanicsMesh.cpp:30)
==3305357==    by 0x121C94: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96)
==3305357==    by 0x124E62: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74)
==3305357==    by 0x124D47: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61)
==3305357==    by 0x124BED: CxxTest::TestRunner::runWorld() (TestRunner.h:46)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357== 
{
   <insert_a_suppression_name_here>
   Memcheck:Param
   pwrite64(buf)
   fun:__libc_pwrite64
   fun:pwrite
   fun:mca_fbtl_posix_pwritev
   fun:mca_common_ompio_file_write
   fun:mca_common_ompio_file_write_at
   fun:mca_io_ompio_file_write_at
   fun:PMPI_File_write_at
   obj:/usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0
   fun:H5FD_write
   fun:H5F__accum_write
   fun:H5PB_write
   fun:H5F_block_write
   fun:H5C__flush_single_entry
   fun:H5C_apply_candidate_list
   fun:H5AC__run_sync_point
   fun:H5AC__flush_entries
   fun:H5AC_flush
   obj:/usr/lib/x86_64-linux-gnu/libhdf5_openmpi.so.103.3.0
   fun:H5F__dest
   fun:H5F_try_close
   fun:H5F__close_cb
   fun:H5I_dec_ref
   fun:H5I_dec_app_ref
   fun:H5F__close
   fun:H5Fclose
   fun:_ZN14Hdf5DataWriter5CloseEv
   fun:_ZN14Hdf5DataWriterD1Ev
   fun:_ZN14Hdf5DataWriterD0Ev
   fun:_ZN36VoltageInterpolaterOntoMechanicsMeshILj1EEC1ER15TetrahedralMeshILj1ELj1EER13QuadraticMeshILj1EERSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISD_EESD_SD_
   fun:_ZN40TestVoltageInterpolaterOntoMechanicsMesh14TestWith1dDataEv
   fun:_ZN71TestDescription_TestVoltageInterpolaterOntoMechanicsMesh_TestWith1dData7runTestEv
   fun:_ZN7CxxTest19RealTestDescription3runEv
   fun:_ZN7CxxTest10TestRunner7runTestERNS_15TestDescriptionE
   fun:_ZN7CxxTest10TestRunner8runSuiteERNS_16SuiteDescriptionE
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==3305357== 
==3305357== FILE DESCRIPTORS: 9 open (3 std) at exit.
==3305357== Open file descriptor 12:
==3305357==    at 0xB23422D: pipe (pipe.c:29)
==3305357==    by 0x13CC507D: ???
==3305357==    by 0xF4C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0xB5C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xB560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0x98CBD38: PetscInitialize (pinit.c:924)
==3305357==    by 0x979F66F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==3305357==    by 0x979F6BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==3305357==    by 0x128164: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==3305357==    by 0x12245D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==3305357==    by 0x124BB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357== 
==3305357== Open file descriptor 8: /dev/shm/open_mpi.0000
==3305357==    at 0xB238BCC: __open_nocancel (open64_nocancel.c:39)
==3305357==    by 0xB1BCC4F: shm_open@@GLIBC_2.34 (shm_open.c:40)
==3305357==    by 0xAB55822: ???
==3305357==    by 0xAB5596F: ???
==3305357==    by 0xF56D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==3305357==    by 0xF56D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==3305357==    by 0xF523922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==3305357==    by 0xF4C82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0xB5C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xB560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0x98CBD38: PetscInitialize (pinit.c:924)
==3305357==    by 0x979F66F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==3305357==    by 0x979F6BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==3305357==    by 0x128164: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==3305357==    by 0x12245D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==3305357==    by 0x124BB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357== 
==3305357== Open file descriptor 117:
==3305357==    <inherited from parent>
==3305357== 
==3305357== Open file descriptor 108:
==3305357==    <inherited from parent>
==3305357== 
==3305357== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVoltageInterpolaterOntoMechanicsMesh_valgrind.txt
==3305357==    <inherited from parent>
==3305357== 
==3305357== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp
==3305357==    <inherited from parent>
==3305357== 
==3305357== 
==3305357== HEAP SUMMARY:
==3305357==     in use at exit: 701,239 bytes in 9,387 blocks
==3305357==   total heap usage: 548,098 allocs, 538,711 frees, 1,537,721,453 bytes allocated
==3305357== 
==3305357== 32 bytes in 1 blocks are possibly lost in loss record 16 of 72
==3305357==    at 0x484DA83: calloc (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==3305357==    by 0x1570671E: ???
==3305357==    by 0x15706E0B: ???
==3305357==    by 0x15709F56: ???
==3305357==    by 0x156FF65D: ???
==3305357==    by 0x156FFFA3: ???
==3305357==    by 0xF5D9F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==3305357==    by 0xF5B5AE8: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==3305357==    by 0xF566CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==3305357==    by 0xF493EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0x13CC5F03: ???
==3305357==    by 0xF4C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0xB5C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xB560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0x98CBD38: PetscInitialize (pinit.c:924)
==3305357==    by 0x979F66F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==3305357==    by 0x979F6BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==3305357==    by 0x128164: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==3305357==    by 0x12245D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==3305357==    by 0x124BB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: possible
   fun:calloc
   obj:*
   obj:*
   obj:*
   obj:*
   obj:*
   obj:/usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2
   fun:hwloc_topology_load
   fun:opal_hwloc_base_get_topology
   fun:orte_ess_base_proc_binding
   obj:*
   fun:orte_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==3305357== 408 bytes in 3 blocks are possibly lost in loss record 43 of 72
==3305357==    at 0x484DA83: calloc (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==3305357==    by 0x157066E8: ???
==3305357==    by 0x15706E0B: ???
==3305357==    by 0x15709F56: ???
==3305357==    by 0x156FF65D: ???
==3305357==    by 0x156FFFA3: ???
==3305357==    by 0xF5D9F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==3305357==    by 0xF5B5AE8: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==3305357==    by 0xF566CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==3305357==    by 0xF493EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0x13CC5F03: ???
==3305357==    by 0xF4C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0xB5C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xB560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0x98CBD38: PetscInitialize (pinit.c:924)
==3305357==    by 0x979F66F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==3305357==    by 0x979F6BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==3305357==    by 0x128164: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==3305357==    by 0x12245D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==3305357==    by 0x124BB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: possible
   fun:calloc
   obj:*
   obj:*
   obj:*
   obj:*
   obj:*
   obj:/usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2
   fun:hwloc_topology_load
   fun:opal_hwloc_base_get_topology
   fun:orte_ess_base_proc_binding
   obj:*
   fun:orte_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==3305357== 552 bytes in 1 blocks are definitely lost in loss record 46 of 72
==3305357==    at 0x484DA83: calloc (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==3305357==    by 0x14593C13: ???
==3305357==    by 0x1459422C: ???
==3305357==    by 0x145074B7: ???
==3305357==    by 0xB52D15A: ompi_proc_complete_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xB5C7A97: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xB560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0x98CBD38: PetscInitialize (pinit.c:924)
==3305357==    by 0x979F66F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==3305357==    by 0x979F6BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==3305357==    by 0x128164: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==3305357==    by 0x12245D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==3305357==    by 0x124BB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:calloc
   obj:*
   obj:*
   obj:*
   fun:ompi_proc_complete_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==3305357== 84,001 (136 direct, 83,865 indirect) bytes in 1 blocks are definitely lost in loss record 69 of 72
==3305357==    at 0x484DA83: calloc (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so)
==3305357==    by 0x1570674E: ???
==3305357==    by 0x15706E0B: ???
==3305357==    by 0x15709F56: ???
==3305357==    by 0x156FF65D: ???
==3305357==    by 0x156FFFA3: ???
==3305357==    by 0xF5D9F05: ??? (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==3305357==    by 0xF5B5AE8: hwloc_topology_load (in /usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2)
==3305357==    by 0xF566CB5: opal_hwloc_base_get_topology (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2)
==3305357==    by 0xF493EF6: orte_ess_base_proc_binding (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0x13CC5F03: ???
==3305357==    by 0xF4C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2)
==3305357==    by 0xB5C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0xB560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2)
==3305357==    by 0x98CBD38: PetscInitialize (pinit.c:924)
==3305357==    by 0x979F66F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80)
==3305357==    by 0x979F6BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88)
==3305357==    by 0x128164: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61)
==3305357==    by 0x12245D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266)
==3305357==    by 0x124BB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43)
==3305357==    by 0x124AB0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23)
==3305357==    by 0x1250C3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47)
==3305357==    by 0x120C60: main (TestVoltageInterpolaterOntoMechanicsMesh.cpp:18)
==3305357== 
{
   <insert_a_suppression_name_here>
   Memcheck:Leak
   match-leak-kinds: definite
   fun:calloc
   obj:*
   obj:*
   obj:*
   obj:*
   obj:*
   obj:/usr/lib/x86_64-linux-gnu/libhwloc.so.15.5.2
   fun:hwloc_topology_load
   fun:opal_hwloc_base_get_topology
   fun:orte_ess_base_proc_binding
   obj:*
   fun:orte_init
   fun:ompi_mpi_init
   fun:PMPI_Init_thread
   fun:PetscInitialize
   fun:_ZN15PetscSetupUtils15InitialisePetscEv
   fun:_ZN15PetscSetupUtils11CommonSetupEv
   fun:_ZN10PetscSetup10setUpWorldEv
   fun:_ZN7CxxTest20RealWorldDescription5setUpEv
   fun:_ZN7CxxTest10TestRunner8runWorldEv
   fun:_ZN7CxxTest10TestRunner11runAllTestsERNS_12TestListenerE
   fun:_ZN7CxxTest14ErrorFormatter3runEv
   fun:main
}
==3305357== LEAK SUMMARY:
==3305357==    definitely lost: 688 bytes in 2 blocks
==3305357==    indirectly lost: 1,320 bytes in 12 blocks
==3305357==      possibly lost: 440 bytes in 4 blocks
==3305357==    still reachable: 1,531 bytes in 6 blocks
==3305357==         suppressed: 697,260 bytes in 9,363 blocks
==3305357== Reachable blocks (those to which a pointer was found) are not shown.
==3305357== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==3305357== 
==3305357== Use --track-origins=yes to see where uninitialised values come from
==3305357== For lists of detected and suppressed errors, rerun with: -s
==3305357== ERROR SUMMARY: 16 errors from 8 contexts (suppressed: 33 from 33)
