==939371== Memcheck, a memory error detector ==939371== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==939371== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==939371== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestHoneycombMeshGenerator -malloc_debug -malloc_dump -memory_info ==939371== Parent PID: 938885 ==939371== ==939371== ==939371== FILE DESCRIPTORS: 9 open (3 std) at exit. ==939371== Open file descriptor 12: ==939371== at 0x7ADD22D: pipe (pipe.c:29) ==939371== by 0xF9E507D: ??? ==939371== by 0xB31F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==939371== by 0x7302418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==939371== by 0x729BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==939371== by 0x5F70D38: PetscInitialize (pinit.c:924) ==939371== by 0x5E4458B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==939371== by 0x5E445D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==939371== by 0x124DA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==939371== by 0x11E8CF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==939371== by 0x121740: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==939371== by 0x1215E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==939371== by 0x121C77: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==939371== by 0x11CC00: main (TestHoneycombMeshGenerator.cpp:19) ==939371== ==939371== Open file descriptor 8: /dev/shm/open_mpi.0000 ==939371== at 0x7AE1BCC: __open_nocancel (open64_nocancel.c:39) ==939371== by 0x7A65C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==939371== by 0x71FA822: ??? ==939371== by 0x71FA96F: ??? ==939371== by 0xB3C46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==939371== by 0xB3C4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==939371== by 0xB37A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==939371== by 0xB31F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==939371== by 0x7302418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==939371== by 0x729BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==939371== by 0x5F70D38: PetscInitialize (pinit.c:924) ==939371== by 0x5E4458B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==939371== by 0x5E445D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==939371== by 0x124DA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==939371== by 0x11E8CF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==939371== by 0x121740: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==939371== by 0x1215E0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==939371== by 0x121C77: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==939371== by 0x11CC00: main (TestHoneycombMeshGenerator.cpp:19) ==939371== ==939371== Open file descriptor 116: ==939371== ==939371== ==939371== Open file descriptor 111: ==939371== ==939371== ==939371== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHoneycombMeshGenerator_valgrind.txt ==939371== ==939371== ==939371== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==939371== ==939371== ==939371== ==939371== HEAP SUMMARY: ==939371== in use at exit: 703,194 bytes in 9,378 blocks ==939371== total heap usage: 1,202,001 allocs, 1,192,623 frees, 1,393,853,135 bytes allocated ==939371== ==939371== LEAK SUMMARY: ==939371== definitely lost: 0 bytes in 0 blocks ==939371== indirectly lost: 0 bytes in 0 blocks ==939371== possibly lost: 0 bytes in 0 blocks ==939371== still reachable: 2,576 bytes in 3 blocks ==939371== suppressed: 700,618 bytes in 9,375 blocks ==939371== Reachable blocks (those to which a pointer was found) are not shown. ==939371== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==939371== ==939371== For lists of detected and suppressed errors, rerun with: -s ==939371== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)