==945361== Memcheck, a memory error detector ==945361== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==945361== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==945361== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==945361== Parent PID: 938885 ==945361== ==945361== ==945361== FILE DESCRIPTORS: 9 open (3 std) at exit. ==945361== Open file descriptor 12: ==945361== at 0xE08D22D: pipe (pipe.c:29) ==945361== by 0x17B0C07D: ??? ==945361== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==945361== by 0xF9BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==945361== by 0xF954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==945361== by 0xE64BD38: PetscInitialize (pinit.c:924) ==945361== by 0xD8A958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==945361== by 0xD8A95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==945361== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==945361== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==945361== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==945361== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==945361== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==945361== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==945361== ==945361== Open file descriptor 8: /dev/shm/open_mpi.0000 ==945361== at 0xE091BCC: __open_nocancel (open64_nocancel.c:39) ==945361== by 0xE015C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==945361== by 0xD8E1822: ??? ==945361== by 0xD8E196F: ??? ==945361== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==945361== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==945361== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==945361== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==945361== by 0xF9BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==945361== by 0xF954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==945361== by 0xE64BD38: PetscInitialize (pinit.c:924) ==945361== by 0xD8A958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==945361== by 0xD8A95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==945361== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==945361== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==945361== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==945361== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==945361== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==945361== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==945361== ==945361== Open file descriptor 116: ==945361== ==945361== ==945361== Open file descriptor 111: ==945361== ==945361== ==945361== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==945361== ==945361== ==945361== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==945361== ==945361== ==945361== ==945361== HEAP SUMMARY: ==945361== in use at exit: 700,770 bytes in 9,378 blocks ==945361== total heap usage: 2,336,168 allocs, 2,326,790 frees, 1,789,078,778 bytes allocated ==945361== ==945361== LEAK SUMMARY: ==945361== definitely lost: 0 bytes in 0 blocks ==945361== indirectly lost: 0 bytes in 0 blocks ==945361== possibly lost: 0 bytes in 0 blocks ==945361== still reachable: 56 bytes in 3 blocks ==945361== suppressed: 700,714 bytes in 9,375 blocks ==945361== Reachable blocks (those to which a pointer was found) are not shown. ==945361== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==945361== ==945361== For lists of detected and suppressed errors, rerun with: -s ==945361== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)