==955237== Memcheck, a memory error detector ==955237== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==955237== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==955237== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==955237== Parent PID: 938885 ==955237== ==955237== ==955237== FILE DESCRIPTORS: 9 open (3 std) at exit. ==955237== Open file descriptor 12: ==955237== at 0xF0AB22D: pipe (pipe.c:29) ==955237== by 0x17B0C07D: ??? ==955237== by 0x130704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==955237== by 0xE9B5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==955237== by 0xE94ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==955237== by 0xD625D38: PetscInitialize (pinit.c:924) ==955237== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==955237== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==955237== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==955237== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==955237== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==955237== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==955237== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==955237== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==955237== ==955237== Open file descriptor 8: /dev/shm/open_mpi.0000 ==955237== at 0xF0AFBCC: __open_nocancel (open64_nocancel.c:39) ==955237== by 0xF033C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==955237== by 0xE8AF822: ??? ==955237== by 0xE8AF96F: ??? ==955237== by 0x131156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==955237== by 0x13115938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==955237== by 0x130CB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==955237== by 0x130702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==955237== by 0xE9B5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==955237== by 0xE94ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==955237== by 0xD625D38: PetscInitialize (pinit.c:924) ==955237== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==955237== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==955237== by 0x12CB4D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==955237== by 0x126A6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==955237== by 0x1291FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==955237== by 0x12909D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==955237== by 0x129733: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==955237== by 0x124DA0: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==955237== ==955237== Open file descriptor 116: ==955237== ==955237== ==955237== Open file descriptor 111: ==955237== ==955237== ==955237== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==955237== ==955237== ==955237== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==955237== ==955237== ==955237== ==955237== HEAP SUMMARY: ==955237== in use at exit: 700,770 bytes in 9,378 blocks ==955237== total heap usage: 3,333,495 allocs, 3,324,117 frees, 2,276,560,824 bytes allocated ==955237== ==955237== LEAK SUMMARY: ==955237== definitely lost: 0 bytes in 0 blocks ==955237== indirectly lost: 0 bytes in 0 blocks ==955237== possibly lost: 0 bytes in 0 blocks ==955237== still reachable: 56 bytes in 3 blocks ==955237== suppressed: 700,714 bytes in 9,375 blocks ==955237== Reachable blocks (those to which a pointer was found) are not shown. ==955237== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==955237== ==955237== For lists of detected and suppressed errors, rerun with: -s ==955237== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)