==956735== Memcheck, a memory error detector ==956735== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==956735== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==956735== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==956735== Parent PID: 938885 ==956735== ==956735== ==956735== FILE DESCRIPTORS: 9 open (3 std) at exit. ==956735== Open file descriptor 12: ==956735== at 0xC6BC22D: pipe (pipe.c:29) ==956735== by 0x17B0E07D: ??? ==956735== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==956735== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==956735== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==956735== by 0xE564D38: PetscInitialize (pinit.c:924) ==956735== by 0xBFBF58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==956735== by 0xBFBF5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==956735== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==956735== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==956735== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==956735== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==956735== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==956735== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==956735== ==956735== Open file descriptor 8: /dev/shm/open_mpi.0000 ==956735== at 0xC6C0BCC: __open_nocancel (open64_nocancel.c:39) ==956735== by 0xC644C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==956735== by 0xBFF7822: ??? ==956735== by 0xBFF796F: ??? ==956735== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==956735== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==956735== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==956735== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==956735== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==956735== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==956735== by 0xE564D38: PetscInitialize (pinit.c:924) ==956735== by 0xBFBF58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==956735== by 0xBFBF5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==956735== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==956735== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==956735== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==956735== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==956735== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==956735== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==956735== ==956735== Open file descriptor 116: ==956735== ==956735== ==956735== Open file descriptor 111: ==956735== ==956735== ==956735== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==956735== ==956735== ==956735== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==956735== ==956735== ==956735== ==956735== HEAP SUMMARY: ==956735== in use at exit: 700,702 bytes in 9,374 blocks ==956735== total heap usage: 39,441,476 allocs, 39,432,102 frees, 3,793,234,879 bytes allocated ==956735== ==956735== LEAK SUMMARY: ==956735== definitely lost: 0 bytes in 0 blocks ==956735== indirectly lost: 0 bytes in 0 blocks ==956735== possibly lost: 0 bytes in 0 blocks ==956735== still reachable: 56 bytes in 3 blocks ==956735== suppressed: 700,646 bytes in 9,371 blocks ==956735== Reachable blocks (those to which a pointer was found) are not shown. ==956735== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==956735== ==956735== For lists of detected and suppressed errors, rerun with: -s ==956735== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)