==1003574== Memcheck, a memory error detector ==1003574== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1003574== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1003574== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellKillers -malloc_debug -malloc_dump -memory_info ==1003574== Parent PID: 1001960 ==1003574== ==1003574== ==1003574== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1003574== Open file descriptor 12: ==1003574== at 0xF1D422D: pipe (pipe.c:29) ==1003574== by 0x17B0C07D: ??? ==1003574== by 0x130704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1003574== by 0xE9F7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003574== by 0xE990D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003574== by 0xD687D38: PetscInitialize (pinit.c:924) ==1003574== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1003574== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1003574== by 0x1AED0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1003574== by 0x1A53D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1003574== by 0x1A8ABE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1003574== by 0x1A895E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1003574== by 0x1A8FF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1003574== by 0x1A36C0: main (TestCellKillers.cpp:19) ==1003574== ==1003574== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1003574== at 0xF1D8BCC: __open_nocancel (open64_nocancel.c:39) ==1003574== by 0xF15CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1003574== by 0xD531822: ??? ==1003574== by 0xD53196F: ??? ==1003574== by 0x131156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003574== by 0x13115938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003574== by 0x130CB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003574== by 0x130702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1003574== by 0xE9F7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003574== by 0xE990D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003574== by 0xD687D38: PetscInitialize (pinit.c:924) ==1003574== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1003574== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1003574== by 0x1AED0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1003574== by 0x1A53D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1003574== by 0x1A8ABE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1003574== by 0x1A895E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1003574== by 0x1A8FF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1003574== by 0x1A36C0: main (TestCellKillers.cpp:19) ==1003574== ==1003574== Open file descriptor 116: ==1003574== ==1003574== ==1003574== Open file descriptor 111: ==1003574== ==1003574== ==1003574== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellKillers_valgrind.txt ==1003574== ==1003574== ==1003574== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1003574== ==1003574== ==1003574== ==1003574== HEAP SUMMARY: ==1003574== in use at exit: 700,775 bytes in 9,378 blocks ==1003574== total heap usage: 116,447 allocs, 107,069 frees, 1,358,806,581 bytes allocated ==1003574== ==1003574== LEAK SUMMARY: ==1003574== definitely lost: 0 bytes in 0 blocks ==1003574== indirectly lost: 0 bytes in 0 blocks ==1003574== possibly lost: 0 bytes in 0 blocks ==1003574== still reachable: 56 bytes in 3 blocks ==1003574== suppressed: 700,719 bytes in 9,375 blocks ==1003574== Reachable blocks (those to which a pointer was found) are not shown. ==1003574== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1003574== ==1003574== For lists of detected and suppressed errors, rerun with: -s ==1003574== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)