==1003085== Memcheck, a memory error detector ==1003085== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1003085== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1003085== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==1003085== Parent PID: 1001960 ==1003085== ==1003085== ==1003085== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1003085== Open file descriptor 12: ==1003085== at 0xD82C22D: pipe (pipe.c:29) ==1003085== by 0x17B0D07D: ??? ==1003085== by 0x1205B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1003085== by 0xD47D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003085== by 0xD416D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003085== by 0xC0EDD38: PetscInitialize (pinit.c:924) ==1003085== by 0xBFBF58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1003085== by 0xBFBF5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1003085== by 0x1339D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1003085== by 0x12D06F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1003085== by 0x130082: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1003085== by 0x12FF22: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1003085== by 0x1305B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1003085== by 0x12B3A0: main (TestCell.cpp:19) ==1003085== ==1003085== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1003085== at 0xD830BCC: __open_nocancel (open64_nocancel.c:39) ==1003085== by 0xD7B4C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1003085== by 0xD377822: ??? ==1003085== by 0xD37796F: ??? ==1003085== by 0x121006DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003085== by 0x12100938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003085== by 0x120B6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003085== by 0x1205B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1003085== by 0xD47D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003085== by 0xD416D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003085== by 0xC0EDD38: PetscInitialize (pinit.c:924) ==1003085== by 0xBFBF58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1003085== by 0xBFBF5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1003085== by 0x1339D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1003085== by 0x12D06F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1003085== by 0x130082: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1003085== by 0x12FF22: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1003085== by 0x1305B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1003085== by 0x12B3A0: main (TestCell.cpp:19) ==1003085== ==1003085== Open file descriptor 116: ==1003085== ==1003085== ==1003085== Open file descriptor 111: ==1003085== ==1003085== ==1003085== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==1003085== ==1003085== ==1003085== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1003085== ==1003085== ==1003085== ==1003085== HEAP SUMMARY: ==1003085== in use at exit: 700,832 bytes in 9,375 blocks ==1003085== total heap usage: 5,109,354 allocs, 5,099,979 frees, 1,830,399,397 bytes allocated ==1003085== ==1003085== LEAK SUMMARY: ==1003085== definitely lost: 0 bytes in 0 blocks ==1003085== indirectly lost: 0 bytes in 0 blocks ==1003085== possibly lost: 0 bytes in 0 blocks ==1003085== still reachable: 184 bytes in 4 blocks ==1003085== suppressed: 700,648 bytes in 9,371 blocks ==1003085== Reachable blocks (those to which a pointer was found) are not shown. ==1003085== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1003085== ==1003085== For lists of detected and suppressed errors, rerun with: -s ==1003085== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)