==1003822== Memcheck, a memory error detector ==1003822== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1003822== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1003822== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==1003822== Parent PID: 1001960 ==1003822== ==1003822== ==1003822== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1003822== Open file descriptor 12: ==1003822== at 0xDCDB22D: pipe (pipe.c:29) ==1003822== by 0x17B0E07D: ??? ==1003822== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1003822== by 0xF9BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003822== by 0xF954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003822== by 0xE64BD38: PetscInitialize (pinit.c:924) ==1003822== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1003822== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1003822== by 0x144DEE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1003822== by 0x13E1EF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1003822== by 0x1410AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1003822== by 0x140F4C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1003822== by 0x1415E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1003822== by 0x13C520: main (TestNumericalMethods.cpp:19) ==1003822== ==1003822== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1003822== at 0xDCDFBCC: __open_nocancel (open64_nocancel.c:39) ==1003822== by 0xDC63C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1003822== by 0xD531822: ??? ==1003822== by 0xD53196F: ??? ==1003822== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003822== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003822== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003822== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1003822== by 0xF9BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003822== by 0xF954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003822== by 0xE64BD38: PetscInitialize (pinit.c:924) ==1003822== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1003822== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1003822== by 0x144DEE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1003822== by 0x13E1EF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1003822== by 0x1410AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1003822== by 0x140F4C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1003822== by 0x1415E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1003822== by 0x13C520: main (TestNumericalMethods.cpp:19) ==1003822== ==1003822== Open file descriptor 116: ==1003822== ==1003822== ==1003822== Open file descriptor 111: ==1003822== ==1003822== ==1003822== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==1003822== ==1003822== ==1003822== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1003822== ==1003822== ==1003822== ==1003822== HEAP SUMMARY: ==1003822== in use at exit: 700,775 bytes in 9,378 blocks ==1003822== total heap usage: 69,238 allocs, 59,860 frees, 1,356,616,757 bytes allocated ==1003822== ==1003822== LEAK SUMMARY: ==1003822== definitely lost: 0 bytes in 0 blocks ==1003822== indirectly lost: 0 bytes in 0 blocks ==1003822== possibly lost: 0 bytes in 0 blocks ==1003822== still reachable: 56 bytes in 3 blocks ==1003822== suppressed: 700,719 bytes in 9,375 blocks ==1003822== Reachable blocks (those to which a pointer was found) are not shown. ==1003822== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1003822== ==1003822== For lists of detected and suppressed errors, rerun with: -s ==1003822== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)