==1016559== Memcheck, a memory error detector ==1016559== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1016559== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1016559== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1016559== Parent PID: 1001960 ==1016559== ==1016559== ==1016559== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1016559== Open file descriptor 12: ==1016559== at 0xDBF422D: pipe (pipe.c:29) ==1016559== by 0x17B0E07D: ??? ==1016559== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1016559== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1016559== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1016559== by 0xE564D38: PetscInitialize (pinit.c:924) ==1016559== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1016559== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1016559== by 0x12E472: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1016559== by 0x12863D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1016559== by 0x12AAF8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1016559== by 0x12A9F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1016559== by 0x12B007: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1016559== by 0x126E40: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==1016559== ==1016559== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1016559== at 0xDBF8BCC: __open_nocancel (open64_nocancel.c:39) ==1016559== by 0xDB7CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1016559== by 0xD531822: ??? ==1016559== by 0xD53196F: ??? ==1016559== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1016559== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1016559== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1016559== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1016559== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1016559== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1016559== by 0xE564D38: PetscInitialize (pinit.c:924) ==1016559== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1016559== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1016559== by 0x12E472: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1016559== by 0x12863D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1016559== by 0x12AAF8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1016559== by 0x12A9F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1016559== by 0x12B007: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1016559== by 0x126E40: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==1016559== ==1016559== Open file descriptor 116: ==1016559== ==1016559== ==1016559== Open file descriptor 111: ==1016559== ==1016559== ==1016559== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==1016559== ==1016559== ==1016559== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1016559== ==1016559== ==1016559== ==1016559== HEAP SUMMARY: ==1016559== in use at exit: 700,704 bytes in 9,374 blocks ==1016559== total heap usage: 4,819,763 allocs, 4,810,389 frees, 1,773,296,862 bytes allocated ==1016559== ==1016559== LEAK SUMMARY: ==1016559== definitely lost: 0 bytes in 0 blocks ==1016559== indirectly lost: 0 bytes in 0 blocks ==1016559== possibly lost: 0 bytes in 0 blocks ==1016559== still reachable: 56 bytes in 3 blocks ==1016559== suppressed: 700,648 bytes in 9,371 blocks ==1016559== Reachable blocks (those to which a pointer was found) are not shown. ==1016559== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1016559== ==1016559== For lists of detected and suppressed errors, rerun with: -s ==1016559== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)