==1002616== Memcheck, a memory error detector ==1002616== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1002616== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1002616== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestVertexMesh -malloc_debug -malloc_dump -memory_info ==1002616== Parent PID: 1001960 ==1002616== ==1002616== ==1002616== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1002616== Open file descriptor 12: ==1002616== at 0x7B2122D: pipe (pipe.c:29) ==1002616== by 0xF9E507D: ??? ==1002616== by 0xB31F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1002616== by 0x7344418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1002616== by 0x72DDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1002616== by 0x5FD4D38: PetscInitialize (pinit.c:924) ==1002616== by 0x5E4458B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1002616== by 0x5E445D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1002616== by 0x14FEEB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1002616== by 0x148C5F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1002616== by 0x14C612: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1002616== by 0x14C4B2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1002616== by 0x14CB49: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1002616== by 0x146F90: main (TestVertexMesh.cpp:19) ==1002616== ==1002616== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1002616== at 0x7B25BCC: __open_nocancel (open64_nocancel.c:39) ==1002616== by 0x7AA9C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1002616== by 0x5E7C822: ??? ==1002616== by 0x5E7C96F: ??? ==1002616== by 0xB3C46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1002616== by 0xB3C4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1002616== by 0xB37A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1002616== by 0xB31F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1002616== by 0x7344418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1002616== by 0x72DDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1002616== by 0x5FD4D38: PetscInitialize (pinit.c:924) ==1002616== by 0x5E4458B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1002616== by 0x5E445D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1002616== by 0x14FEEB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1002616== by 0x148C5F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1002616== by 0x14C612: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1002616== by 0x14C4B2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1002616== by 0x14CB49: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1002616== by 0x146F90: main (TestVertexMesh.cpp:19) ==1002616== ==1002616== Open file descriptor 116: ==1002616== ==1002616== ==1002616== Open file descriptor 111: ==1002616== ==1002616== ==1002616== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexMesh_valgrind.txt ==1002616== ==1002616== ==1002616== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1002616== ==1002616== ==1002616== ==1002616== HEAP SUMMARY: ==1002616== in use at exit: 703,199 bytes in 9,378 blocks ==1002616== total heap usage: 74,011 allocs, 64,633 frees, 1,360,492,181 bytes allocated ==1002616== ==1002616== LEAK SUMMARY: ==1002616== definitely lost: 0 bytes in 0 blocks ==1002616== indirectly lost: 0 bytes in 0 blocks ==1002616== possibly lost: 0 bytes in 0 blocks ==1002616== still reachable: 2,576 bytes in 3 blocks ==1002616== suppressed: 700,623 bytes in 9,375 blocks ==1002616== Reachable blocks (those to which a pointer was found) are not shown. ==1002616== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1002616== ==1002616== For lists of detected and suppressed errors, rerun with: -s ==1002616== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)