==1112548== Memcheck, a memory error detector ==1112548== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1112548== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1112548== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==1112548== Parent PID: 1110851 ==1112548== ==1112548== ==1112548== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1112548== Open file descriptor 12: ==1112548== at 0xF19222D: pipe (pipe.c:29) ==1112548== by 0x17B0C07D: ??? ==1112548== by 0x130704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1112548== by 0xE9B5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112548== by 0xE94ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112548== by 0xD625D38: PetscInitialize (pinit.c:924) ==1112548== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1112548== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1112548== by 0x16965F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1112548== by 0x16034F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1112548== by 0x1638A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1112548== by 0x163744: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1112548== by 0x163DDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1112548== by 0x15E680: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==1112548== ==1112548== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1112548== at 0xF196BCC: __open_nocancel (open64_nocancel.c:39) ==1112548== by 0xF11AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1112548== by 0xE8AF822: ??? ==1112548== by 0xE8AF96F: ??? ==1112548== by 0x131156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1112548== by 0x13115938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1112548== by 0x130CB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1112548== by 0x130702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1112548== by 0xE9B5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112548== by 0xE94ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112548== by 0xD625D38: PetscInitialize (pinit.c:924) ==1112548== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1112548== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1112548== by 0x16965F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1112548== by 0x16034F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1112548== by 0x1638A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1112548== by 0x163744: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1112548== by 0x163DDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1112548== by 0x15E680: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==1112548== ==1112548== Open file descriptor 116: ==1112548== ==1112548== ==1112548== Open file descriptor 111: ==1112548== ==1112548== ==1112548== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==1112548== ==1112548== ==1112548== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1112548== ==1112548== ==1112548== ==1112548== HEAP SUMMARY: ==1112548== in use at exit: 700,775 bytes in 9,378 blocks ==1112548== total heap usage: 220,007 allocs, 210,629 frees, 1,378,240,343 bytes allocated ==1112548== ==1112548== LEAK SUMMARY: ==1112548== definitely lost: 0 bytes in 0 blocks ==1112548== indirectly lost: 0 bytes in 0 blocks ==1112548== possibly lost: 0 bytes in 0 blocks ==1112548== still reachable: 56 bytes in 3 blocks ==1112548== suppressed: 700,719 bytes in 9,375 blocks ==1112548== Reachable blocks (those to which a pointer was found) are not shown. ==1112548== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1112548== ==1112548== For lists of detected and suppressed errors, rerun with: -s ==1112548== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)