==1112551== Memcheck, a memory error detector ==1112551== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1112551== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1112551== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1112551== Parent PID: 1110851 ==1112551== ==1112551== ==1112551== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1112551== Open file descriptor 12: ==1112551== at 0xDCD722D: pipe (pipe.c:29) ==1112551== by 0x17B0E07D: ??? ==1112551== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1112551== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112551== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112551== by 0xE562D38: PetscInitialize (pinit.c:924) ==1112551== by 0xD59858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1112551== by 0xD5985D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1112551== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1112551== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1112551== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1112551== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1112551== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1112551== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==1112551== ==1112551== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1112551== at 0xDCDBBCC: __open_nocancel (open64_nocancel.c:39) ==1112551== by 0xDC5FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1112551== by 0xD5D0822: ??? ==1112551== by 0xD5D096F: ??? ==1112551== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1112551== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1112551== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1112551== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1112551== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112551== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112551== by 0xE562D38: PetscInitialize (pinit.c:924) ==1112551== by 0xD59858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1112551== by 0xD5985D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1112551== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1112551== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1112551== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1112551== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1112551== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1112551== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==1112551== ==1112551== Open file descriptor 116: ==1112551== ==1112551== ==1112551== Open file descriptor 111: ==1112551== ==1112551== ==1112551== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==1112551== ==1112551== ==1112551== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1112551== ==1112551== ==1112551== ==1112551== HEAP SUMMARY: ==1112551== in use at exit: 700,704 bytes in 9,374 blocks ==1112551== total heap usage: 20,192,188 allocs, 20,182,814 frees, 2,577,756,319 bytes allocated ==1112551== ==1112551== LEAK SUMMARY: ==1112551== definitely lost: 0 bytes in 0 blocks ==1112551== indirectly lost: 0 bytes in 0 blocks ==1112551== possibly lost: 0 bytes in 0 blocks ==1112551== still reachable: 56 bytes in 3 blocks ==1112551== suppressed: 700,648 bytes in 9,371 blocks ==1112551== Reachable blocks (those to which a pointer was found) are not shown. ==1112551== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1112551== ==1112551== For lists of detected and suppressed errors, rerun with: -s ==1112551== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)