==1130670== Memcheck, a memory error detector ==1130670== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1130670== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1130670== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==1130670== Parent PID: 1110851 ==1130670== ==1130670== ==1130670== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1130670== Open file descriptor 12: ==1130670== at 0xF6E222D: pipe (pipe.c:29) ==1130670== by 0x193EE07D: ??? ==1130670== by 0x1398F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1130670== by 0xEFEC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1130670== by 0xEF85D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1130670== by 0xDC7CD38: PetscInitialize (pinit.c:924) ==1130670== by 0xDAEE58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1130670== by 0xDAEE5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1130670== by 0x19DA6D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1130670== by 0x1941B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1130670== by 0x19785C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1130670== by 0x1976FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1130670== by 0x197D93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1130670== by 0x18FFA0: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==1130670== ==1130670== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1130670== at 0xF6E6BCC: __open_nocancel (open64_nocancel.c:39) ==1130670== by 0xF66AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1130670== by 0xDB26822: ??? ==1130670== by 0xDB2696F: ??? ==1130670== by 0x13A346DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1130670== by 0x13A34938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1130670== by 0x139EA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1130670== by 0x1398F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1130670== by 0xEFEC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1130670== by 0xEF85D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1130670== by 0xDC7CD38: PetscInitialize (pinit.c:924) ==1130670== by 0xDAEE58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1130670== by 0xDAEE5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1130670== by 0x19DA6D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1130670== by 0x1941B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1130670== by 0x19785C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1130670== by 0x1976FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1130670== by 0x197D93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1130670== by 0x18FFA0: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==1130670== ==1130670== Open file descriptor 116: ==1130670== ==1130670== ==1130670== Open file descriptor 111: ==1130670== ==1130670== ==1130670== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==1130670== ==1130670== ==1130670== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1130670== ==1130670== ==1130670== ==1130670== HEAP SUMMARY: ==1130670== in use at exit: 700,855 bytes in 9,379 blocks ==1130670== total heap usage: 863,169 allocs, 853,790 frees, 1,475,814,593 bytes allocated ==1130670== ==1130670== LEAK SUMMARY: ==1130670== definitely lost: 0 bytes in 0 blocks ==1130670== indirectly lost: 0 bytes in 0 blocks ==1130670== possibly lost: 0 bytes in 0 blocks ==1130670== still reachable: 120 bytes in 4 blocks ==1130670== suppressed: 700,735 bytes in 9,375 blocks ==1130670== Reachable blocks (those to which a pointer was found) are not shown. ==1130670== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1130670== ==1130670== For lists of detected and suppressed errors, rerun with: -s ==1130670== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)