==1112329== Memcheck, a memory error detector ==1112329== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1112329== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1112329== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsElement -malloc_debug -malloc_dump -memory_info ==1112329== Parent PID: 1110851 ==1112329== ==1112329== ==1112329== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1112329== Open file descriptor 12: ==1112329== at 0xD8AF22D: pipe (pipe.c:29) ==1112329== by 0x17B0E07D: ??? ==1112329== by 0x130C14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1112329== by 0xF58F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112329== by 0xF528D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112329== by 0xE21DD38: PetscInitialize (pinit.c:924) ==1112329== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1112329== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1112329== by 0x11B508: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1112329== by 0x116A25: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1112329== by 0x1194A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1112329== by 0x119342: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1112329== by 0x1199D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1112329== by 0x114D55: main (TestPottsElement.cpp:19) ==1112329== ==1112329== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1112329== at 0xD8B3BCC: __open_nocancel (open64_nocancel.c:39) ==1112329== by 0xD837C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1112329== by 0xD531822: ??? ==1112329== by 0xD53196F: ??? ==1112329== by 0x131666DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1112329== by 0x13166938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1112329== by 0x1311C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1112329== by 0x130C12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1112329== by 0xF58F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112329== by 0xF528D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1112329== by 0xE21DD38: PetscInitialize (pinit.c:924) ==1112329== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1112329== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1112329== by 0x11B508: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1112329== by 0x116A25: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1112329== by 0x1194A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1112329== by 0x119342: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1112329== by 0x1199D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1112329== by 0x114D55: main (TestPottsElement.cpp:19) ==1112329== ==1112329== Open file descriptor 116: ==1112329== ==1112329== ==1112329== Open file descriptor 111: ==1112329== ==1112329== ==1112329== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsElement_valgrind.txt ==1112329== ==1112329== ==1112329== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1112329== ==1112329== ==1112329== ==1112329== HEAP SUMMARY: ==1112329== in use at exit: 700,743 bytes in 9,377 blocks ==1112329== total heap usage: 54,439 allocs, 45,062 frees, 1,353,821,838 bytes allocated ==1112329== ==1112329== LEAK SUMMARY: ==1112329== definitely lost: 0 bytes in 0 blocks ==1112329== indirectly lost: 0 bytes in 0 blocks ==1112329== possibly lost: 0 bytes in 0 blocks ==1112329== still reachable: 24 bytes in 2 blocks ==1112329== suppressed: 700,719 bytes in 9,375 blocks ==1112329== Reachable blocks (those to which a pointer was found) are not shown. ==1112329== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1112329== ==1112329== For lists of detected and suppressed errors, rerun with: -s ==1112329== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)