==1128587== Memcheck, a memory error detector ==1128587== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1128587== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1128587== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1128587== Parent PID: 1110851 ==1128587== ==1128587== ==1128587== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1128587== Open file descriptor 12: ==1128587== at 0xC6BC22D: pipe (pipe.c:29) ==1128587== by 0x17B0E07D: ??? ==1128587== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1128587== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1128587== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1128587== by 0xE564D38: PetscInitialize (pinit.c:924) ==1128587== by 0xBFBF58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1128587== by 0xBFBF5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1128587== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1128587== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1128587== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1128587== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1128587== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1128587== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1128587== ==1128587== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1128587== at 0xC6C0BCC: __open_nocancel (open64_nocancel.c:39) ==1128587== by 0xC644C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1128587== by 0xBFF7822: ??? ==1128587== by 0xBFF796F: ??? ==1128587== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1128587== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1128587== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1128587== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1128587== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1128587== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1128587== by 0xE564D38: PetscInitialize (pinit.c:924) ==1128587== by 0xBFBF58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1128587== by 0xBFBF5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1128587== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1128587== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1128587== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1128587== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1128587== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1128587== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1128587== ==1128587== Open file descriptor 116: ==1128587== ==1128587== ==1128587== Open file descriptor 111: ==1128587== ==1128587== ==1128587== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==1128587== ==1128587== ==1128587== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1128587== ==1128587== ==1128587== ==1128587== HEAP SUMMARY: ==1128587== in use at exit: 700,704 bytes in 9,374 blocks ==1128587== total heap usage: 39,441,473 allocs, 39,432,099 frees, 3,793,234,606 bytes allocated ==1128587== ==1128587== LEAK SUMMARY: ==1128587== definitely lost: 0 bytes in 0 blocks ==1128587== indirectly lost: 0 bytes in 0 blocks ==1128587== possibly lost: 0 bytes in 0 blocks ==1128587== still reachable: 56 bytes in 3 blocks ==1128587== suppressed: 700,648 bytes in 9,371 blocks ==1128587== Reachable blocks (those to which a pointer was found) are not shown. ==1128587== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1128587== ==1128587== For lists of detected and suppressed errors, rerun with: -s ==1128587== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)