==1130713== Memcheck, a memory error detector ==1130713== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1130713== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1130713== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSingleOdeWntCellCycleModel -malloc_debug -malloc_dump -memory_info ==1130713== Parent PID: 1110851 ==1130713== ==1130713== ==1130713== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1130713== Open file descriptor 12: ==1130713== at 0xF49622D: pipe (pipe.c:29) ==1130713== by 0x193EE07D: ??? ==1130713== by 0x1393C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1130713== by 0xEDA0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1130713== by 0xED39D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1130713== by 0xDA30D38: PetscInitialize (pinit.c:924) ==1130713== by 0xD8A258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1130713== by 0xD8A25D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1130713== by 0x1961C3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1130713== by 0x18D1DB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1130713== by 0x190592: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1130713== by 0x19048D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1130713== by 0x190AA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1130713== by 0x18ADE0: main (TestSingleOdeWntCellCycleModel.cpp:18) ==1130713== ==1130713== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1130713== at 0xF49ABCC: __open_nocancel (open64_nocancel.c:39) ==1130713== by 0xF41EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1130713== by 0xD8DA822: ??? ==1130713== by 0xD8DA96F: ??? ==1130713== by 0x139E16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1130713== by 0x139E1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1130713== by 0x13997922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1130713== by 0x1393C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1130713== by 0xEDA0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1130713== by 0xED39D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1130713== by 0xDA30D38: PetscInitialize (pinit.c:924) ==1130713== by 0xD8A258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1130713== by 0xD8A25D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1130713== by 0x1961C3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1130713== by 0x18D1DB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1130713== by 0x190592: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1130713== by 0x19048D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1130713== by 0x190AA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1130713== by 0x18ADE0: main (TestSingleOdeWntCellCycleModel.cpp:18) ==1130713== ==1130713== Open file descriptor 116: ==1130713== ==1130713== ==1130713== Open file descriptor 111: ==1130713== ==1130713== ==1130713== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSingleOdeWntCellCycleModel_valgrind.txt ==1130713== ==1130713== ==1130713== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1130713== ==1130713== ==1130713== ==1130713== HEAP SUMMARY: ==1130713== in use at exit: 700,935 bytes in 9,380 blocks ==1130713== total heap usage: 264,356 allocs, 254,976 frees, 1,372,212,790 bytes allocated ==1130713== ==1130713== LEAK SUMMARY: ==1130713== definitely lost: 0 bytes in 0 blocks ==1130713== indirectly lost: 0 bytes in 0 blocks ==1130713== possibly lost: 0 bytes in 0 blocks ==1130713== still reachable: 200 bytes in 5 blocks ==1130713== suppressed: 700,735 bytes in 9,375 blocks ==1130713== Reachable blocks (those to which a pointer was found) are not shown. ==1130713== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1130713== ==1130713== For lists of detected and suppressed errors, rerun with: -s ==1130713== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)