==1187354== Memcheck, a memory error detector ==1187354== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1187354== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1187354== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1187354== Parent PID: 1174373 ==1187354== ==1187354== ==1187354== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1187354== Open file descriptor 12: ==1187354== at 0xE9F622D: pipe (pipe.c:29) ==1187354== by 0x1890D07D: ??? ==1187354== by 0x13F154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1187354== by 0x106D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187354== by 0x1066FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187354== by 0xF366D38: PetscInitialize (pinit.c:924) ==1187354== by 0xE2FB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1187354== by 0xE2FB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1187354== by 0x12E496: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1187354== by 0x12863D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1187354== by 0x12AAF8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1187354== by 0x12A9F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1187354== by 0x12B007: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1187354== by 0x126E40: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==1187354== ==1187354== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1187354== at 0xE9FABCC: __open_nocancel (open64_nocancel.c:39) ==1187354== by 0xE97EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1187354== by 0xE333822: ??? ==1187354== by 0xE33396F: ??? ==1187354== by 0x13FBA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187354== by 0x13FBA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187354== by 0x13F70922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1187354== by 0x13F152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1187354== by 0x106D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187354== by 0x1066FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1187354== by 0xF366D38: PetscInitialize (pinit.c:924) ==1187354== by 0xE2FB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1187354== by 0xE2FB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1187354== by 0x12E496: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1187354== by 0x12863D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1187354== by 0x12AAF8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1187354== by 0x12A9F4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1187354== by 0x12B007: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1187354== by 0x126E40: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==1187354== ==1187354== Open file descriptor 116: ==1187354== ==1187354== ==1187354== Open file descriptor 111: ==1187354== ==1187354== ==1187354== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==1187354== ==1187354== ==1187354== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1187354== ==1187354== ==1187354== ==1187354== HEAP SUMMARY: ==1187354== in use at exit: 700,704 bytes in 9,374 blocks ==1187354== total heap usage: 5,184,903 allocs, 5,175,529 frees, 1,794,597,014 bytes allocated ==1187354== ==1187354== LEAK SUMMARY: ==1187354== definitely lost: 0 bytes in 0 blocks ==1187354== indirectly lost: 0 bytes in 0 blocks ==1187354== possibly lost: 0 bytes in 0 blocks ==1187354== still reachable: 56 bytes in 3 blocks ==1187354== suppressed: 700,648 bytes in 9,371 blocks ==1187354== Reachable blocks (those to which a pointer was found) are not shown. ==1187354== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1187354== ==1187354== For lists of detected and suppressed errors, rerun with: -s ==1187354== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)