==1195033== Memcheck, a memory error detector ==1195033== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1195033== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1195033== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1195033== Parent PID: 1174373 ==1195033== ==1195033== ==1195033== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1195033== Open file descriptor 12: ==1195033== at 0x1178E22D: pipe (pipe.c:29) ==1195033== by 0x1A1F007D: ??? ==1195033== by 0x157524CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1195033== by 0x11098418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1195033== by 0x11031D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1195033== by 0xFD08D38: PetscInitialize (pinit.c:924) ==1195033== by 0xFBDC58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1195033== by 0xFBDC5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1195033== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1195033== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1195033== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1195033== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1195033== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1195033== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==1195033== ==1195033== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1195033== at 0x11792BCC: __open_nocancel (open64_nocancel.c:39) ==1195033== by 0x11716C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1195033== by 0x10F92822: ??? ==1195033== by 0x10F9296F: ??? ==1195033== by 0x157F76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1195033== by 0x157F7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1195033== by 0x157AD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1195033== by 0x157522DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1195033== by 0x11098418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1195033== by 0x11031D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1195033== by 0xFD08D38: PetscInitialize (pinit.c:924) ==1195033== by 0xFBDC58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1195033== by 0xFBDC5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1195033== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1195033== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1195033== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1195033== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1195033== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1195033== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==1195033== ==1195033== Open file descriptor 116: ==1195033== ==1195033== ==1195033== Open file descriptor 111: ==1195033== ==1195033== ==1195033== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==1195033== ==1195033== ==1195033== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1195033== ==1195033== ==1195033== ==1195033== HEAP SUMMARY: ==1195033== in use at exit: 700,791 bytes in 9,378 blocks ==1195033== total heap usage: 1,754,058 allocs, 1,744,680 frees, 1,533,356,803 bytes allocated ==1195033== ==1195033== LEAK SUMMARY: ==1195033== definitely lost: 0 bytes in 0 blocks ==1195033== indirectly lost: 0 bytes in 0 blocks ==1195033== possibly lost: 0 bytes in 0 blocks ==1195033== still reachable: 56 bytes in 3 blocks ==1195033== suppressed: 700,735 bytes in 9,375 blocks ==1195033== Reachable blocks (those to which a pointer was found) are not shown. ==1195033== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1195033== ==1195033== For lists of detected and suppressed errors, rerun with: -s ==1195033== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)