==1258534== Memcheck, a memory error detector ==1258534== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1258534== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1258534== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==1258534== Parent PID: 1235700 ==1258534== ==1258534== ==1258534== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1258534== Open file descriptor 12: ==1258534== at 0xA52622D: pipe (pipe.c:29) ==1258534== by 0x140E807D: ??? ==1258534== by 0xF8E94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1258534== by 0xBC37418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1258534== by 0xBBD0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1258534== by 0xA8C7D38: PetscInitialize (pinit.c:924) ==1258534== by 0x9E0F58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1258534== by 0x9E0F5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1258534== by 0x12D0CE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1258534== by 0x12653D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1258534== by 0x128EF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1258534== by 0x128DEF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1258534== by 0x129403: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1258534== by 0x124D40: main (TestCheckpointing.cpp:18) ==1258534== ==1258534== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1258534== at 0xA52ABCC: __open_nocancel (open64_nocancel.c:39) ==1258534== by 0xA4AEC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1258534== by 0x9E47822: ??? ==1258534== by 0x9E4796F: ??? ==1258534== by 0xF98E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1258534== by 0xF98E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1258534== by 0xF944922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1258534== by 0xF8E92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1258534== by 0xBC37418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1258534== by 0xBBD0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1258534== by 0xA8C7D38: PetscInitialize (pinit.c:924) ==1258534== by 0x9E0F58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1258534== by 0x9E0F5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1258534== by 0x12D0CE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1258534== by 0x12653D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1258534== by 0x128EF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1258534== by 0x128DEF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1258534== by 0x129403: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1258534== by 0x124D40: main (TestCheckpointing.cpp:18) ==1258534== ==1258534== Open file descriptor 116: ==1258534== ==1258534== ==1258534== Open file descriptor 111: ==1258534== ==1258534== ==1258534== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==1258534== ==1258534== ==1258534== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1258534== ==1258534== ==1258534== ==1258534== HEAP SUMMARY: ==1258534== in use at exit: 701,239 bytes in 9,387 blocks ==1258534== total heap usage: 834,241 allocs, 824,854 frees, 1,457,953,007 bytes allocated ==1258534== ==1258534== LEAK SUMMARY: ==1258534== definitely lost: 0 bytes in 0 blocks ==1258534== indirectly lost: 0 bytes in 0 blocks ==1258534== possibly lost: 0 bytes in 0 blocks ==1258534== still reachable: 24 bytes in 2 blocks ==1258534== suppressed: 701,215 bytes in 9,385 blocks ==1258534== Reachable blocks (those to which a pointer was found) are not shown. ==1258534== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1258534== ==1258534== For lists of detected and suppressed errors, rerun with: -s ==1258534== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 62 from 36)