==1253828== Memcheck, a memory error detector ==1253828== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1253828== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1253828== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1253828== Parent PID: 1235700 ==1253828== ==1253828== ==1253828== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1253828== Open file descriptor 12: ==1253828== at 0xD09922D: pipe (pipe.c:29) ==1253828== by 0x1890D07D: ??? ==1253828== by 0x13F154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1253828== by 0x106D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1253828== by 0x1066FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1253828== by 0xF366D38: PetscInitialize (pinit.c:924) ==1253828== by 0xC99C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1253828== by 0xC99C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1253828== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1253828== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1253828== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1253828== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1253828== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1253828== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1253828== ==1253828== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1253828== at 0xD09DBCC: __open_nocancel (open64_nocancel.c:39) ==1253828== by 0xD021C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1253828== by 0xC9D4822: ??? ==1253828== by 0xC9D496F: ??? ==1253828== by 0x13FBA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1253828== by 0x13FBA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1253828== by 0x13F70922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1253828== by 0x13F152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1253828== by 0x106D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1253828== by 0x1066FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1253828== by 0xF366D38: PetscInitialize (pinit.c:924) ==1253828== by 0xC99C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1253828== by 0xC99C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1253828== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1253828== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1253828== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1253828== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1253828== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1253828== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1253828== ==1253828== Open file descriptor 116: ==1253828== ==1253828== ==1253828== Open file descriptor 111: ==1253828== ==1253828== ==1253828== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==1253828== ==1253828== ==1253828== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1253828== ==1253828== ==1253828== ==1253828== HEAP SUMMARY: ==1253828== in use at exit: 700,704 bytes in 9,374 blocks ==1253828== total heap usage: 40,686,523 allocs, 40,677,149 frees, 3,864,483,416 bytes allocated ==1253828== ==1253828== LEAK SUMMARY: ==1253828== definitely lost: 0 bytes in 0 blocks ==1253828== indirectly lost: 0 bytes in 0 blocks ==1253828== possibly lost: 0 bytes in 0 blocks ==1253828== still reachable: 56 bytes in 3 blocks ==1253828== suppressed: 700,648 bytes in 9,371 blocks ==1253828== Reachable blocks (those to which a pointer was found) are not shown. ==1253828== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1253828== ==1253828== For lists of detected and suppressed errors, rerun with: -s ==1253828== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)