==1298193== Memcheck, a memory error detector ==1298193== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1298193== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1298193== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1298193== Parent PID: 1296556 ==1298193== ==1298193== ==1298193== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1298193== Open file descriptor 12: ==1298193== at 0xD0DB22D: pipe (pipe.c:29) ==1298193== by 0x1890D07D: ??? ==1298193== by 0x13F154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1298193== by 0x106D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298193== by 0x1066FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298193== by 0xF366D38: PetscInitialize (pinit.c:924) ==1298193== by 0xC99C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1298193== by 0xC99C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1298193== by 0x13E258: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1298193== by 0x135EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1298193== by 0x138B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1298193== by 0x138A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1298193== by 0x139065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1298193== by 0x1346F0: main (TestCaUpdateRules.cpp:18) ==1298193== ==1298193== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1298193== at 0xD0DFBCC: __open_nocancel (open64_nocancel.c:39) ==1298193== by 0xD063C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1298193== by 0xC9D4822: ??? ==1298193== by 0xC9D496F: ??? ==1298193== by 0x13FBA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1298193== by 0x13FBA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1298193== by 0x13F70922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1298193== by 0x13F152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1298193== by 0x106D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298193== by 0x1066FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298193== by 0xF366D38: PetscInitialize (pinit.c:924) ==1298193== by 0xC99C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1298193== by 0xC99C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1298193== by 0x13E258: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1298193== by 0x135EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1298193== by 0x138B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1298193== by 0x138A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1298193== by 0x139065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1298193== by 0x1346F0: main (TestCaUpdateRules.cpp:18) ==1298193== ==1298193== Open file descriptor 116: ==1298193== ==1298193== ==1298193== Open file descriptor 111: ==1298193== ==1298193== ==1298193== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1298193== ==1298193== ==1298193== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1298193== ==1298193== ==1298193== ==1298193== HEAP SUMMARY: ==1298193== in use at exit: 700,775 bytes in 9,378 blocks ==1298193== total heap usage: 57,334 allocs, 47,956 frees, 1,354,128,031 bytes allocated ==1298193== ==1298193== LEAK SUMMARY: ==1298193== definitely lost: 0 bytes in 0 blocks ==1298193== indirectly lost: 0 bytes in 0 blocks ==1298193== possibly lost: 0 bytes in 0 blocks ==1298193== still reachable: 56 bytes in 3 blocks ==1298193== suppressed: 700,719 bytes in 9,375 blocks ==1298193== Reachable blocks (those to which a pointer was found) are not shown. ==1298193== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1298193== ==1298193== For lists of detected and suppressed errors, rerun with: -s ==1298193== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)