==1298246== Memcheck, a memory error detector ==1298246== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1298246== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1298246== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellwiseDataGradient -malloc_debug -malloc_dump -memory_info ==1298246== Parent PID: 1296556 ==1298246== ==1298246== ==1298246== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1298246== Open file descriptor 12: ==1298246== at 0xE9F622D: pipe (pipe.c:29) ==1298246== by 0x1890D07D: ??? ==1298246== by 0x13F154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1298246== by 0x106D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298246== by 0x1066FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298246== by 0xF366D38: PetscInitialize (pinit.c:924) ==1298246== by 0xE2FB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1298246== by 0xE2FB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1298246== by 0x1284E0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1298246== by 0x12255D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1298246== by 0x124AD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1298246== by 0x1249D0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1298246== by 0x124FE3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1298246== by 0x120D60: main (TestCellwiseDataGradient.cpp:18) ==1298246== ==1298246== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1298246== at 0xE9FABCC: __open_nocancel (open64_nocancel.c:39) ==1298246== by 0xE97EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1298246== by 0xE333822: ??? ==1298246== by 0xE33396F: ??? ==1298246== by 0x13FBA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1298246== by 0x13FBA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1298246== by 0x13F70922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1298246== by 0x13F152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1298246== by 0x106D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298246== by 0x1066FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298246== by 0xF366D38: PetscInitialize (pinit.c:924) ==1298246== by 0xE2FB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1298246== by 0xE2FB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1298246== by 0x1284E0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1298246== by 0x12255D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1298246== by 0x124AD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1298246== by 0x1249D0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1298246== by 0x124FE3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1298246== by 0x120D60: main (TestCellwiseDataGradient.cpp:18) ==1298246== ==1298246== Open file descriptor 116: ==1298246== ==1298246== ==1298246== Open file descriptor 111: ==1298246== ==1298246== ==1298246== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellwiseDataGradient_valgrind.txt ==1298246== ==1298246== ==1298246== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1298246== ==1298246== ==1298246== ==1298246== HEAP SUMMARY: ==1298246== in use at exit: 700,775 bytes in 9,378 blocks ==1298246== total heap usage: 420,449 allocs, 411,071 frees, 1,368,695,944 bytes allocated ==1298246== ==1298246== LEAK SUMMARY: ==1298246== definitely lost: 0 bytes in 0 blocks ==1298246== indirectly lost: 0 bytes in 0 blocks ==1298246== possibly lost: 0 bytes in 0 blocks ==1298246== still reachable: 56 bytes in 3 blocks ==1298246== suppressed: 700,719 bytes in 9,375 blocks ==1298246== Reachable blocks (those to which a pointer was found) are not shown. ==1298246== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1298246== ==1298246== For lists of detected and suppressed errors, rerun with: -s ==1298246== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)