==1298358== Memcheck, a memory error detector ==1298358== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1298358== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1298358== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==1298358== Parent PID: 1296556 ==1298358== ==1298358== ==1298358== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1298358== Open file descriptor 12: ==1298358== at 0xEADD22D: pipe (pipe.c:29) ==1298358== by 0x1891007D: ??? ==1298358== by 0x13F104CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1298358== by 0x107BD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298358== by 0x10756D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298358== by 0xF44DD38: PetscInitialize (pinit.c:924) ==1298358== by 0xE2FB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1298358== by 0xE2FB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1298358== by 0x136C38: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1298358== by 0x13073D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1298358== by 0x132EE8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1298358== by 0x132DE4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1298358== by 0x1333F7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1298358== by 0x12EF40: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==1298358== ==1298358== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1298358== at 0xEAE1BCC: __open_nocancel (open64_nocancel.c:39) ==1298358== by 0xEA65C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1298358== by 0xE333822: ??? ==1298358== by 0xE33396F: ??? ==1298358== by 0x13FB56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1298358== by 0x13FB5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1298358== by 0x13F6B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1298358== by 0x13F102DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1298358== by 0x107BD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298358== by 0x10756D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1298358== by 0xF44DD38: PetscInitialize (pinit.c:924) ==1298358== by 0xE2FB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1298358== by 0xE2FB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1298358== by 0x136C38: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1298358== by 0x13073D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1298358== by 0x132EE8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1298358== by 0x132DE4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1298358== by 0x1333F7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1298358== by 0x12EF40: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==1298358== ==1298358== Open file descriptor 116: ==1298358== ==1298358== ==1298358== Open file descriptor 111: ==1298358== ==1298358== ==1298358== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==1298358== ==1298358== ==1298358== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1298358== ==1298358== ==1298358== ==1298358== HEAP SUMMARY: ==1298358== in use at exit: 700,775 bytes in 9,378 blocks ==1298358== total heap usage: 54,693 allocs, 45,315 frees, 1,353,859,052 bytes allocated ==1298358== ==1298358== LEAK SUMMARY: ==1298358== definitely lost: 0 bytes in 0 blocks ==1298358== indirectly lost: 0 bytes in 0 blocks ==1298358== possibly lost: 0 bytes in 0 blocks ==1298358== still reachable: 56 bytes in 3 blocks ==1298358== suppressed: 700,719 bytes in 9,375 blocks ==1298358== Reachable blocks (those to which a pointer was found) are not shown. ==1298358== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1298358== ==1298358== For lists of detected and suppressed errors, rerun with: -s ==1298358== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)