==1373994== Memcheck, a memory error detector ==1373994== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1373994== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1373994== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1373994== Parent PID: 1372398 ==1373994== ==1373994== ==1373994== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1373994== Open file descriptor 12: ==1373994== at 0xC6FE22D: pipe (pipe.c:29) ==1373994== by 0x17B0E07D: ??? ==1373994== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373994== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373994== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373994== by 0xE564D38: PetscInitialize (pinit.c:924) ==1373994== by 0xBFBF58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373994== by 0xBFBF5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373994== by 0x13E258: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1373994== by 0x135EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373994== by 0x138B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373994== by 0x138A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373994== by 0x139065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373994== by 0x1346F0: main (TestCaUpdateRules.cpp:18) ==1373994== ==1373994== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1373994== at 0xC702BCC: __open_nocancel (open64_nocancel.c:39) ==1373994== by 0xC686C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1373994== by 0xBFF7822: ??? ==1373994== by 0xBFF796F: ??? ==1373994== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373994== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373994== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373994== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373994== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373994== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373994== by 0xE564D38: PetscInitialize (pinit.c:924) ==1373994== by 0xBFBF58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373994== by 0xBFBF5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373994== by 0x13E258: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1373994== by 0x135EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373994== by 0x138B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373994== by 0x138A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373994== by 0x139065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373994== by 0x1346F0: main (TestCaUpdateRules.cpp:18) ==1373994== ==1373994== Open file descriptor 116: ==1373994== ==1373994== ==1373994== Open file descriptor 111: ==1373994== ==1373994== ==1373994== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1373994== ==1373994== ==1373994== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1373994== ==1373994== ==1373994== ==1373994== HEAP SUMMARY: ==1373994== in use at exit: 700,775 bytes in 9,378 blocks ==1373994== total heap usage: 56,981 allocs, 47,603 frees, 1,354,091,983 bytes allocated ==1373994== ==1373994== LEAK SUMMARY: ==1373994== definitely lost: 0 bytes in 0 blocks ==1373994== indirectly lost: 0 bytes in 0 blocks ==1373994== possibly lost: 0 bytes in 0 blocks ==1373994== still reachable: 56 bytes in 3 blocks ==1373994== suppressed: 700,719 bytes in 9,375 blocks ==1373994== Reachable blocks (those to which a pointer was found) are not shown. ==1373994== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1373994== ==1373994== For lists of detected and suppressed errors, rerun with: -s ==1373994== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)