==1372637== Memcheck, a memory error detector ==1372637== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1372637== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1372637== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==1372637== Parent PID: 1372398 ==1372637== ==1372637== ==1372637== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1372637== Open file descriptor 12: ==1372637== at 0x620022D: pipe (pipe.c:29) ==1372637== by 0xAF5F07D: ??? ==1372637== by 0x8A744CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1372637== by 0x5E51418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1372637== by 0x5DEAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1372637== by 0x4ABFD38: PetscInitialize (pinit.c:924) ==1372637== by 0x499358B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1372637== by 0x49935D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1372637== by 0x124CC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1372637== by 0x11E86F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1372637== by 0x1217B6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1372637== by 0x121656: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1372637== by 0x121CED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1372637== by 0x11CBA0: main (TestColumnDataReaderWriter.cpp:19) ==1372637== ==1372637== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1372637== at 0x6204BCC: __open_nocancel (open64_nocancel.c:39) ==1372637== by 0x6188C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1372637== by 0x5D49822: ??? ==1372637== by 0x5D4996F: ??? ==1372637== by 0x8B196DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1372637== by 0x8B19938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1372637== by 0x8ACF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1372637== by 0x8A742DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1372637== by 0x5E51418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1372637== by 0x5DEAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1372637== by 0x4ABFD38: PetscInitialize (pinit.c:924) ==1372637== by 0x499358B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1372637== by 0x49935D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1372637== by 0x124CC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1372637== by 0x11E86F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1372637== by 0x1217B6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1372637== by 0x121656: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1372637== by 0x121CED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1372637== by 0x11CBA0: main (TestColumnDataReaderWriter.cpp:19) ==1372637== ==1372637== Open file descriptor 116: ==1372637== ==1372637== ==1372637== Open file descriptor 111: ==1372637== ==1372637== ==1372637== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==1372637== ==1372637== ==1372637== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1372637== ==1372637== ==1372637== ==1372637== HEAP SUMMARY: ==1372637== in use at exit: 700,295 bytes in 9,377 blocks ==1372637== total heap usage: 63,871 allocs, 54,494 frees, 1,356,097,581 bytes allocated ==1372637== ==1372637== LEAK SUMMARY: ==1372637== definitely lost: 0 bytes in 0 blocks ==1372637== indirectly lost: 0 bytes in 0 blocks ==1372637== possibly lost: 0 bytes in 0 blocks ==1372637== still reachable: 24 bytes in 2 blocks ==1372637== suppressed: 700,271 bytes in 9,375 blocks ==1372637== Reachable blocks (those to which a pointer was found) are not shown. ==1372637== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1372637== ==1372637== For lists of detected and suppressed errors, rerun with: -s ==1372637== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)